Pairwise Alignments

Query, 246 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  130 bits (328), Expect = 2e-35
 Identities = 81/232 (34%), Positives = 127/232 (54%), Gaps = 10/232 (4%)

Query: 6   ILLADDDAALLTSLSDYFGRYGFDVDTAANLADMRRLSEEGHYDLLIAEPMMPGQHTAGL 65
           IL+ DDD  +   L  Y  R GF V   A+    R   E    DL+I + M+P +    L
Sbjct: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67

Query: 66  ---LREFAFERRIPVIIHSRASSDIDRILGLEMGAEDYLTKPCNARELLARANAALRARR 122
              +R+   + R+P+I+ + +S + DR++GLE+GA+DYL KP + REL AR  A LR   
Sbjct: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLR--- 124

Query: 123 RQADAGTMATAPRDNSWVAFQGWRFDLTTRQLFDPSGGTISLSEGEYQLLRVFVANARQV 182
            + + G   TAP  N+ +AF  WR D  + +LF   G  + LS  ++ LL++F+ + +Q+
Sbjct: 125 -RTEFGQ--TAP-GNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQI 180

Query: 183 LNRHQLLDQVYGASSDHYDRAIDVQLCRLRRKLSAGGLKGQTIRTVRNEGYI 234
           L+R  + +   G      DR +D+ + RLR++L       + IRTVR  GY+
Sbjct: 181 LDRDTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYL 232