Pairwise Alignments

Query, 538 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 2e-29
 Identities = 105/408 (25%), Positives = 185/408 (45%), Gaps = 37/408 (9%)

Query: 143 RASLKQKGLTFSLSYKAEAMDNLDGGVERGADYVHELTLQMHFDLDKLVGL-RGWTLHAL 201
           R  L++ G+  +  Y  E   N  GG+ R A Y   + L + FDL KL GL  G  +   
Sbjct: 40  RHQLEEDGVKITGDYSGETAYNAHGGLHRSARYSQNVKLGVQFDLSKLYGLDNGGKVQLT 99

Query: 202 VMNRVGHQVSTDRLGERYINLMEVYGLTGGVAAHLVDFYLQKTMLDGRLDVAVGRMSLTH 261
           + +R G+  S D +G R + + E Y   GG+   L +   ++T+    L+V +G M++ +
Sbjct: 100 INDRRGNSASEDLVGNR-LPIQENY---GGLYTRLTELSYERTLFTPALNVKLGYMAMGN 155

Query: 262 VFA--TSPLLCSFMVT--CSAPVILKRAPGFAVYPKATMGGRVRLRPTRDTSVQLGVYQV 317
                 S +LC+FM    C  P+ +    G+  YP A +G RV+   +    +++  + V
Sbjct: 156 DLGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNAHLGVRVKYDLSPAWQLRVAAFNV 215

Query: 318 TPLASNPSGWAW--GSERTTGVMLPIEFTWQPFLTDKKLPGHYVFGYARDTSRYADLMTT 375
            P ++  S  AW  G + TTG ++P+E  ++      +LPG Y  GY  D+S   D+   
Sbjct: 216 DPESNGNSSRAWHLGPKHTTGTVVPVELVYK---LQGELPGEYKLGYYYDSS---DVKRI 269

Query: 376 GAANAIKRDSTPPSAPMNMYWFEGDQMIYRKGGSDQMSGGYLM--FGYVHNTPRVAALSD 433
           G+ + +        +    ++   DQ ++    +DQ S G  +  FG    + + A+   
Sbjct: 270 GSDDEV--------SGRGGHYLLVDQAVW----NDQASPGRSLHAFGQYSASSKAASPFT 317

Query: 434 QYY-AGFSFNGVVPHRDTDRFGVLWSWYHVSDRLRLNQMYLIDSGQSLGASVLAPQTSSH 492
           ++Y AG         R  D   + +     + R R     L D+  + G       ++  
Sbjct: 318 KWYGAGVVLYKPFEGRPKDTVALGYGRAVPNPRSR---DVLEDAAFNAGQQFPDIDSAEQ 374

Query: 493 VIEAYYSIDVMPGLQLQPEFDYMIRPGETT--KTPDATLLGMKIIANF 538
           +IE  Y     P L L+P+  Y+I PG  +     +A ++G+++ A F
Sbjct: 375 LIELSYGYQATPWLNLRPDVQYIIEPGAFSGKDIDNALVVGLQVKATF 422