Pairwise Alignments

Query, 538 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 444 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  120 bits (302), Expect = 8e-32
 Identities = 104/409 (25%), Positives = 170/409 (41%), Gaps = 19/409 (4%)

Query: 143 RASLKQKGLTFSLSYKAEAMDNLDGGVE--RGADYVHELTLQMHFDLDKLVGLRGWTLHA 200
           R+ L +KG  F+L Y  E   NL GG +  R A Y  + T   H DL+K++G        
Sbjct: 42  RSELLEKGYDFTLGYTGEMGSNLHGGYDHDRTARYSDQFTFGSHLDLEKILGWHDTEFQL 101

Query: 201 LVMNRVGHQVSTDRLGER----YINLMEVYGLTGGVAAHLVDFYLQKTMLDGRLDVAVGR 256
            V  R G  +S DR+ +     + +  EV+G   G    L   ++++   DG LDV  GR
Sbjct: 102 TVTERHGDNISNDRINDPRVGGFTSAQEVWGR--GETWRLTQMWIKQKYFDGALDVKFGR 159

Query: 257 MSLTHVFATSPLLCSFMVTCSAPVILKRAPGFAVYPKATMGGRVRLRPTRDTSVQLGVYQ 316
                 F + P     +  C + V       +  +P +    RVR   T +   Q+GV++
Sbjct: 160 FGEGEDFNSFPCDFQNLAFCGSQVGNWVGGIWYNWPVSQWALRVRYNLTPELYAQVGVFE 219

Query: 317 VTPL-ASNPSGWAWGSERTTGVMLPIEFTWQPFLTDKKLPGHYVFGYARDTSRYADLM-- 373
             P    + +G+      T G ++P E  W P +  + L G Y  GY    ++  D++  
Sbjct: 220 QNPSNLESGNGFKLSGSGTQGAVMPFELVWTPRI--QGLKGEYRAGYYYSNAKAQDVLKD 277

Query: 374 TTGAANAIKRDSTPPSAPMNMYWFEGDQMIYRKGGSDQMSGGYLMFGYVHNTPRVAALSD 433
           + G   A+   +   S+  +  W    Q +     SDQ  G  +      +  +  A+ +
Sbjct: 278 SNGQPAALSGAAYRSSSSKHGLWIGAQQQVTSLA-SDQSRGLSVFANATVHDKKTNAIDN 336

Query: 434 QYYAGFSFNGVVPHRDTDRFGVLWSWYHVSDRLRLNQMYLIDSGQSL----GASVLAPQT 489
              AG  F G    R  D  G   +  HV+   R N   L++    L        L  Q 
Sbjct: 337 YVQAGLVFKGPFDARAKDDIGFALARVHVNPAYRKNAR-LVNQAAGLYDYDNPGFLPVQD 395

Query: 490 SSHVIEAYYSIDVMPGLQLQPEFDYMIRPGETTKTPDATLLGMKIIANF 538
           + +  E YY I +   L ++P   Y+  PG  ++   A + G+KI ++F
Sbjct: 396 TEYSAELYYGIHLADWLTVRPNLQYIRHPGGVSQVDGALIGGLKIQSSF 444