Pairwise Alignments

Query, 302 a.a., Transcriptional regulator CidR, LysR family from Sphingobium sp. HT1-2

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 78/289 (26%), Positives = 136/289 (47%), Gaps = 16/289 (5%)

Query: 3   MEFRLLRSFTEVVRCGGFSQAARSLASTQSTISKAVKQLENELGTILLDRSGHRCVMTPA 62
           ME R LR F  V     F +AA+ L  +Q  +S+ ++ LE ELG  L DR+  R  ++ A
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 63  GEVVYRRGIKLLADRDDVLAELDEIRGLQRGVLRLGIPSVGNIKLFAP-VVCTYRERYPQ 121
           G +      ++LA  +         +  + G +++G  S        P  +  +R+R+P 
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120

Query: 122 IELRLIEHGSNQLEKHLRAGDIDIAGILEPQ--SPDFEWEPIRSKPIVALLSSVHPLSRC 179
           + L L E  S  + + +    I++ G++ P           +  +P+VA++++ HPL+  
Sbjct: 121 VHLNLKEMSSRDVAEGVFDESIEV-GLMRPMPLPEGLVATELFREPLVAVINASHPLAEG 179

Query: 180 --GSLKLTDLRDVPFVLF--DLGFRLHGMILNASRKAGFEPTVAVTSSQIDFMIELVSTN 235
               + +  L   PFV F    G  LH  +L+ +R AGF P  A  + +   +I LVS  
Sbjct: 180 TEQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAG 239

Query: 236 VGVAFLPSEIVDEKHLQGIV-SVPLDEAEL--AWVM----GHAWRRNAY 277
           +GV+ LP+       ++G+V    LDE  +   W++    GH+    A+
Sbjct: 240 LGVSVLPASF-QRMRIEGVVYRTLLDEEAMTAVWLVQRERGHSVMAKAF 287