Pairwise Alignments

Query, 302 a.a., Transcriptional regulator CidR, LysR family from Sphingobium sp. HT1-2

Subject, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  116 bits (291), Expect = 5e-31
 Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 6/292 (2%)

Query: 3   MEFRLLRSFTEVVRCGGFSQAARSLASTQSTISKAVKQLENELGTILLDRSGHRCVMTPA 62
           M  + LR   E+VR G F++AA+ L   Q  +S AV +LE ELG  L +R+  + ++T  
Sbjct: 1   MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAE 60

Query: 63  GEVVYRRGIKLLADRDDVLAELDEIRGLQRGVLRLGIPSVGNIKLFAPVVCTYRERYPQI 122
           GE    R    L + D    EL ++  L+RG +RLGIP +  +     ++  +R+ YP I
Sbjct: 61  GEQFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPGI 120

Query: 123 ELRLIEHGSNQLEKHLRAGDIDIAGILEPQ--SPDFEWEPIRSKPIVALLSSVHPLSRCG 180
            + + E  +  +   L   +ID+A +LE +   PD E   + S  ++A +   HP +   
Sbjct: 121 AMTVFEGSAEDIGHRLEQREIDLA-LLESRRVPPDKESILLGSDEMLACMHPDHPYAGKA 179

Query: 181 SLKLTDLRDVPFVLFDLGFRLHGMILNASRKAGFEPTVAVTSSQIDFMIELVSTNVGVAF 240
            L   DLR+   V+FD  F    ++     + G    VA+ S+ +  +++    N+GVA 
Sbjct: 180 YLTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQAALDNMGVAT 239

Query: 241 LPSEIVDEKHLQGIVSVPLDEAELAWVMGHAWRRNAYLSDATVAWMKLMRET 292
           L   +  ++   GIV VP   A+        WR   YLS A+  ++    +T
Sbjct: 240 LLRSV--QQRTPGIVGVPFRPAQ-QMSFRLCWRSGEYLSLASKRFIDFAAQT 288