Pairwise Alignments

Query, 156 a.a., Transcription elongation factor GreB from Sphingobium sp. HT1-2

Subject, 160 a.a., Transcription elongation factor GreA from Pseudomonas putida KT2440

 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 80  PDGEAVAFGTRVTYRLNK--QEKTVAIVGDDEADPHEGRISFSAPLARAMMDAEMGEAVD 137
           P    V FGT V     +  +E T  IVG+DEAD  +G++S  AP+ARA++  E G+ V 
Sbjct: 83  PHTGKVIFGTTVVLANTETDEEVTYQIVGEDEADVKQGKLSSGAPIARAIIGKEEGDTVV 142

Query: 138 FAGKDGAIEIVAIGV 152
                G +E   + V
Sbjct: 143 VKTPSGTVEYEIVEV 157



 Score = 21.2 bits (43), Expect = 0.008
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 103 AIVGDDEADPHEGRISFSAPLARAMMDAEMGEAVDFAGKDGA 144
           ++V D    PH G++ F   +  A  + +        G+D A
Sbjct: 74  SVVIDVTTIPHTGKVIFGTTVVLANTETDEEVTYQIVGEDEA 115