Pairwise Alignments

Query, 232 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Sphingobium sp. HT1-2

Subject, 276 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

 Score =  131 bits (330), Expect = 1e-35
 Identities = 96/245 (39%), Positives = 124/245 (50%), Gaps = 41/245 (16%)

Query: 11  SPNYDERSLPITMLVLHYTGMPDAASAINWLANAESKVSAHYVVTEDGQ-------IIRM 63
           SPN +ER   I  LVLHYT   D  S ++ L N  +  SAHY+             ++++
Sbjct: 37  SPNQNER---IRFLVLHYTVFDDKNS-LDALTNGTA--SAHYLAYSTPHKHHNLPVVLQL 90

Query: 64  VAEDKRAWHAGRSHWRGIDDVNSASIGIEIVNPGHEWG-----YRPFPEAQMGSLIPLVH 118
           V E KRAWHAG SHW    ++N  SIGIEIVN G   G     + P+ EAQ+  +  L  
Sbjct: 91  VPEAKRAWHAGVSHWGNRANLNDTSIGIEIVNAGFIEGPTGRLWFPYTEAQLALVKHLAA 150

Query: 119 DIVQRHRITRGNIVGHSDIAPARKQDPGELFPWGQLARLRL-ALP-----------RPTK 166
           D+++R+ I   N+VGHSDIAP RK DPG LFPW  L+   + A P           RP  
Sbjct: 151 DVIKRYAIEPQNVVGHSDIAPFRKSDPGPLFPWQALSEHGIGAWPDAVTVHKHLAGRPES 210

Query: 167 NLMDPHWTDSGFMLALERFGYDIA-------EPEPAVVAFQRRFRPELIDGVIDGECRAI 219
             +D     S    AL  +GY I        E    + AFQ  FRP  I G+ D E  A+
Sbjct: 211 QTVDV----SIVQRALATYGYTIPQSGVLDDETRQVIRAFQMHFRPAGISGIPDAETEAV 266

Query: 220 LLALL 224
            LAL+
Sbjct: 267 ALALV 271