Pairwise Alignments

Query, 232 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Sphingobium sp. HT1-2

Subject, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

 Score =  141 bits (356), Expect = 1e-38
 Identities = 93/234 (39%), Positives = 129/234 (55%), Gaps = 26/234 (11%)

Query: 10  PSPNYDERSLPITMLVLHYTGMPDAASAINWLANAESKVSAHYVVTED-GQIIRMVAEDK 68
           PS N D R   I  +VLHYT   +A+   +       +VS+HY++ +    + ++V E++
Sbjct: 31  PSANQDNR---IQFVVLHYT---NASLERSLALLTHGEVSSHYLIGDGPATVYQLVDENR 84

Query: 69  RAWHAGRSHWRGIDDVNSASIGIEIVNPG-----HEWGYRPFPEAQMGSLIPLVHDIVQR 123
           RAWHAG S W+G   +NS+SIGIEIVNPG     +   + P+ EAQ+ +LI L+ DIV+R
Sbjct: 85  RAWHAGESQWQGRTWLNSSSIGIEIVNPGFTDTPNGRVWHPYSEAQVQALIALLKDIVKR 144

Query: 124 HRITRGNIVGHSDIAPARKQDPGELFPWGQLARLRL-------ALPRPTKNLMDPHWTDS 176
           + I   +I+GHSDIAP RK DPG LFPW +LA   L       A+ R          +  
Sbjct: 145 NNIEPRHIIGHSDIAPLRKLDPGPLFPWKRLADAGLGIWPDANAVARQQAYFSVNPPSVG 204

Query: 177 GFMLALERFGYDIAE-------PEPAVVAFQRRFRPELIDGVIDGECRAILLAL 223
            +   L RFGY I +           V AFQ RFRP+  DG+ D +  A+L  L
Sbjct: 205 WYQQELARFGYQIEQTGVLDVATRHVVAAFQMRFRPQRFDGMPDAQTAAMLQVL 258