Pairwise Alignments

Query, 390 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 114/397 (28%), Positives = 174/397 (43%), Gaps = 54/397 (13%)

Query: 21  RIRRRRRLLIIGGVVAVALVAAAAALSMRGKDAAAPDAAPQAPVVSVLTPGQTMVARTVS 80
           R    RR L++GG+  + L +  A  S+       P  A     V+V    +  +  +V+
Sbjct: 3   RSTHTRRRLLLGGLGLLGLGSLLAWTSL-------PFGAQPVSTVAVT---RADIESSVT 52

Query: 81  STGSLAARVDMPVGVVGEGGMVTRVLVQPGDWVRAGQVLATVERSVQSEQ-------VNS 133
           + G+L  R  + VG    G  +  + V+ GD V  GQ+L  ++ S Q  +       +++
Sbjct: 53  ALGTLQPRRYVDVGAQASG-QIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDN 111

Query: 134 LAAQVEVQRANAKLAQAQLERAKALVGRGF-------ISAADIDQRTATRDQAVAQVRVA 186
           L AQ+  QRA  KLAQ QL+R + L   G         + A ++   A  D   AQ+R A
Sbjct: 112 LKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQA 171

Query: 187 EAQLAEQRARTGRLDIRAPASGLVLTRTVEPGQIVQAGGGT--LFRMAKDGEMEMQAQVA 244
            A L    A  G   I AP  G V+      GQ + A   T  + R+AK   M + AQV+
Sbjct: 172 NASLRSDEAELGYTRIFAPMDGTVVAVDAREGQTLNAQQQTPLILRIAKLSPMTVWAQVS 231

Query: 245 EADLATLRAGNSATVTPV-GSNQHFSGRVWQVSPVVD---PQTRQGIARIA--------- 291
           EAD+  ++ G +A  T + G  + ++  V QV P+      QT QG    A         
Sbjct: 232 EADIGKIQPGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGS 291

Query: 292 --VAYN---DAIRPGGFASATITS------GSGNTPLLPESAV--QSDAKGSYVYIVNGK 338
             V Y    D   P G   A +T+      G  +  L    A    SD +G  +  V G+
Sbjct: 292 QVVQYTVLLDVDNPDGALMAEMTTQVFFVVGQASQVLSAPLAALDDSDNEGLRLAQVFGR 351

Query: 339 N-QVERRDVKVGQVSDTGVAITSGITGAERIVTSAGA 374
           + +VE+R V+ G      V I  G++  +R+V  A A
Sbjct: 352 DGKVEQRKVRTGLSDRLRVQILDGLSEGDRLVIGAPA 388