Pairwise Alignments

Query, 390 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 97/380 (25%), Positives = 162/380 (42%), Gaps = 38/380 (10%)

Query: 25  RRRLLIIGGVVAVALVAAAAALSMRGKDAAAPDAAPQAPV-VSVLTPGQTMVARTVSSTG 83
           RRR+LI+  VV + ++A     +           AP+ P+ V+     Q      + + G
Sbjct: 24  RRRMLIMLAVVLLIVLALGGYKAFSIYQQIQMFTAPKPPITVAAAMAEQRPWQERLPAVG 83

Query: 84  SLAARVDMPVGVVGEGGMVTRVLVQPGDWVRAGQVLATVERSVQSEQVNSLAAQVEVQRA 143
           SL A   + + +  EG +V  +    G  V+AGQ+L  +    ++  + +  A +     
Sbjct: 84  SLKALQGVDLSLEVEG-IVKSLHFDSGQQVKAGQLLLQLNDDQETALLGTALADLG---- 138

Query: 144 NAKLAQAQLERAKALVGRGFISAADIDQRTATRDQAVAQVRVAEAQLAEQRARTGRLDIR 203
              LA+    R   LVG   IS  + D+ ++   +  A V   +AQ  ++R       I 
Sbjct: 139 ---LAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKR-------IN 188

Query: 204 APASGLVLTRTVEPGQIVQAGGGTLFRMAKD-GEMEMQAQVAEADLATLRAGNSATVTPV 262
           AP SG +  R V+ GQ + AG  T+    +D   + +   V E  L  L  G    V   
Sbjct: 189 APFSGTIGIRQVDIGQYLAAG--TVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVA 246

Query: 263 G-SNQHFSGRVWQVSPVVDPQTRQGIARIAVAYNDA-IRPGGFASATITSGSGNTPLL-P 319
               Q F G +  ++P V+  TR  + R  +A  D  + PG FAS  I   +    ++ P
Sbjct: 247 AYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVVVP 306

Query: 320 ESAVQSDAKGSYVYIVNGKNQ----------------VERRDVKVGQVSDTGVAITSGIT 363
           ESA+     G+ VY+ + +                   E+R VK G+  D  V ++ G+ 
Sbjct: 307 ESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQ 366

Query: 364 GAERIVTSAGAFLTVGQKVK 383
             E++VT+    LT G  ++
Sbjct: 367 AGEQVVTAGQLKLTPGAAIR 386