Pairwise Alignments

Query, 390 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 368 a.a., Multidrug resistance protein MdtA from Acinetobacter radioresistens SK82

 Score =  102 bits (254), Expect = 2e-26
 Identities = 89/341 (26%), Positives = 157/341 (46%), Gaps = 7/341 (2%)

Query: 46  LSMRGKDAAAPDAAPQAPVVSVLTPGQTMVARTVSSTGSLAARVDMPVGVVGEGGMVTRV 105
           L++ G    AP    + P V V  P  T   +  S  G + AR    +     GG VT  
Sbjct: 17  LTLGGCSREAPQTE-EIPYVMVAQPLTTHHEQK-SYAGEVQARQQTALAF-RVGGQVTAR 73

Query: 106 LVQPGDWVRAGQVLATVERSVQSEQVNSLAAQVEVQRANAKLAQAQLERAKALVGRGFIS 165
           L + GD VRAGQVLA ++ S    Q N+  AQ+E  +A  K+A  +L+R + L+    +S
Sbjct: 74  LAEVGDRVRAGQVLARLDVSDAQLQSNAARAQLESAQAALKIAADELQRFRQLLPMNAVS 133

Query: 166 AADIDQRTATRDQAVAQVRVAEAQLAEQRARTGRLDIRAPASGLVLTRTVEPGQIVQAGG 225
            +  D        A +  R A++       +T    ++A  +G++  R +E GQ+V A G
Sbjct: 134 RSQYDAVENQYKSAESAYRQAQSNYQVSTNQTRYNQLQANRAGVITERNIEVGQVV-AAG 192

Query: 226 GTLFRMAKDGEMEMQAQVAEADLATLRAGNSATVTPVGSNQ-HFSGRVWQVSPVVDPQTR 284
              +++A DG+ ++   + E   + ++ G +A VT     Q   +  V ++SP  D ++R
Sbjct: 193 QVAYQLAIDGDRDVVIGIPEQTTSAIKVGQTAWVTLWSQPQARLAAYVREISPAAD-ESR 251

Query: 285 QGIARIAVAYN-DAIRPGGFASATITSGSGNTPLLPESAVQSDAKGSYVYIVNGKNQVER 343
               ++A+     AI+ G  A         N   +P S+V +  K  Y++++    ++ +
Sbjct: 252 TFKVKVALREGPSAIQLGQSARVFFDYSQPNVLSVPLSSVSAHEKQPYIWVLQQDQRIHK 311

Query: 344 RDVKVGQVSDTGVAITSGITGAERIVTSAGAFLTVGQKVKP 384
             V++G      V + SG+   + +V      L   Q++ P
Sbjct: 312 VPVQLGAYGRDSVPVLSGLKAGDWVVIGGVHLLHDKQRIHP 352