Pairwise Alignments

Query, 509 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  119 bits (298), Expect = 3e-31
 Identities = 117/404 (28%), Positives = 187/404 (46%), Gaps = 58/404 (14%)

Query: 106 LAVLYDWRPILLASVLIALHHLVLTYVAPNWVFSGQAEIGRVIIHGFAVVLQGTILGYLS 165
           L VL DW P +L S    +  L+  ++  +W F+  A        G +V L   +LG LS
Sbjct: 147 LPVLQDWLPFILIS---QVGFLIGNWLGHSWGFALAA--------GLSVPLG--LLG-LS 192

Query: 166 IKLHGLLLAQDAHVADTARLAREAQAGRNAAESAMDAQRQSDAREAHLRIERDAEKTRMA 225
            +  GL            RL R A+         + AQ  +D+R    R+E       ++
Sbjct: 193 WQQRGL-----------KRLLRLAE---QTTSDPLIAQMFTDSRGVQARLEM----AMLS 234

Query: 226 QDRRSETLALVGAFRQSVAGVVSAVSAATGELKESAGLLHDLA---RRASVGTDETMAAA 282
           QD R +T          +  +  +    + + ++S  L H  +    R  V T++  AA 
Sbjct: 235 QDARMKTC---------LTRLQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAV 285

Query: 283 GQSSASAAVLARRIEQLSESISAIAAAASQQASLGGEA----QRVSVAGHEAMQA---ME 335
            Q +A+   +A  +++ +++        SQ   + GE     +R+S A  E  Q    + 
Sbjct: 286 NQMAATTQEVANHVQRTADATQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLA 345

Query: 336 GRTASITSFADSITEIAARTNLLALNATIEAARAGEVGRGFAVVAGEVKQLANQTASTTG 395
             +  I    D I  IA +TNLLALNA IEAARAGE+GRGFAVVA EV+QLA +TA +TG
Sbjct: 346 KDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTG 405

Query: 396 EIQSLASSARQGAGVA----QEALSEVAGSVEELAQAAQA---IQRAVADQRDATAAIGQ 448
           +I  L +  +Q A  A    +    +    V+ + QA +A   I  AVA+  D    I  
Sbjct: 406 QIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAA 465

Query: 449 SARDTARDADHMAQRMATVADVARNTENLSDRVSSAAAGLSRTA 492
           +  +    AD +++ ++T+A++A  T   +   +  +  L+ TA
Sbjct: 466 ATEEQTAVADEISRNISTIAELADQTAEQAQHSALLSEELTSTA 509



 Score = 35.8 bits (81), Expect = 4e-06
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 3/135 (2%)

Query: 186 AREAQAGRNAAESAMDAQRQSDAREAHLRIERDAEKTRMAQDRRSETLALVGAFRQSVAG 245
           AR  + GR  A  A D  RQ   R A    +      ++ Q   +  L +    RQ+  G
Sbjct: 377 ARAGEMGRGFAVVA-DEVRQLAQRTAESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEG 435

Query: 246 VVSAVSA--ATGELKESAGLLHDLARRASVGTDETMAAAGQSSASAAVLARRIEQLSESI 303
           V   + A  A   + E+   + D+A + +  T+E  A A + S + + +A   +Q +E  
Sbjct: 436 VDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADEISRNISTIAELADQTAEQA 495

Query: 304 SAIAAAASQQASLGG 318
              A  + +  S  G
Sbjct: 496 QHSALLSEELTSTAG 510