Pairwise Alignments

Query, 160 a.a., tmRNA-binding protein SmpB from Sphingobium sp. HT1-2

Subject, 160 a.a., SsrA-binding protein from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 1e-33
 Identities = 65/144 (45%), Positives = 99/144 (68%), Gaps = 2/144 (1%)

Query: 15  VAENRRARFDYFIEDVFEAGIALQGTEVKALRGGEGNIAESYAEVKGNQVFLVNSNI-PE 73
           +A+N++AR DYFIE  FEAG+ L G EVK+LR G+ ++ +SY  +K  + +L  S+I P 
Sbjct: 12  IAQNKKARHDYFIEHKFEAGLVLSGWEVKSLRAGKAHLTDSYVLLKDGEAWLFGSHITPL 71

Query: 74  YSHGNRENHEPKRVRKLLLHEREIEKMHSAVSRKGMTLVPLMVYFNSQGRAKVELALAKG 133
            +       +P R RKLLL++RE+E++ +AV++KG T V L +Y+ S+   K E+AL KG
Sbjct: 72  TTASTHVIADPTRTRKLLLNKRELERVEAAVAQKGYTCVALALYW-SKHLIKCEIALGKG 130

Query: 134 KQNHDKRDTIKERDWKRDQQRIMK 157
           K+  DKRDT++ERD  R+ QR ++
Sbjct: 131 KKEFDKRDTMRERDSNRELQRAVR 154