Pairwise Alignments

Query, 719 a.a., Outer membrane component of TAM transport system from Sphingobium sp. HT1-2

Subject, 575 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 9e-31
 Identities = 132/560 (23%), Positives = 232/560 (41%), Gaps = 49/560 (8%)

Query: 172 VDGKGKAETASMVQQRAQADEQLAVRLFHSEGYYDATALASLDQQQDGTLKAILSVTPGK 231
           + G G  +  ++++    A+EQ A +   + G+Y     +  D +     + IL++ PG+
Sbjct: 45  IGGVGDRDEEALLRFSRGAEEQ-ARKAAQALGFYQPRIES--DVKGGNNPRLILTIDPGE 101

Query: 232 RYKINEIVIHAP---ETIPPGLIRDSLTLKTGDYIVATAVEAAEANVALKLPEHGYAFAR 288
              +  + I        +    +  S  LK+G  +     E A+  +  +   +G+   R
Sbjct: 102 PVHLRNVTIRVDGPAADLKAFRVPVSNDLKSGAVLNHGHYEDAKRLIQNQASRYGFFSGR 161

Query: 289 IGDRDILLDPATVTGDYTLPVEPGPRGTFRTITTSGEKQAFGADHMAVIARFDKGDLYDS 348
              + + +DP     D  L  + GPR T   ++ +G+   F  + +  +  F  G  YDS
Sbjct: 162 FTRQKLAVDPQAGVADIELIYDSGPRYTLGKVSFAGDTP-FDEELLHRMVPFKSGTPYDS 220

Query: 349 RKVDDLRKALVATGLFASVAVDPVQTGEPGPDGTEYVDLHVDQEAGPARRLAGELGYGTG 408
             + +L + L A+G F  V VD      P     + + + V  E    R +   LG+ T 
Sbjct: 221 ELIAELNQNLQASGFFEGVRVDAA----PAASTNDIIPVAVRLETRKPRTMGLGLGFSTD 276

Query: 409 QGFRAEGSWTHRNLFPPEGALI---ASVIAGTQEQGVSGTFRRSNAGKRDKTFQAGAGVN 465
            G R + +WT R+   P+G      A + A  Q  G+       +    DK   AG   N
Sbjct: 277 VGPRGKANWT-RHWVNPQGHSYGWEAELSAPRQNVGLWYDIPL-DPPLTDKLRFAGGYQN 334

Query: 466 HQKYDA---YEAFTLG------LNASWSRQSTPIFQKRWTYTYGGEILLSNENTTIDESG 516
            +  +     +  TLG      L + W+R  +  +Q+   Y  G +  LSN         
Sbjct: 335 EEIANTDTVSKLLTLGPEWHSKLPSGWTRVISLKYQRE-EYRLGNDSGLSNL-------- 385

Query: 517 ENKRLTYFIGALP-VQVGYDRSNDLLNPTSGFRANLRISPEASLQGNVSPYVRASFDLAG 575
                      +P V   Y RS++ ++P +G+R            G+ +  +  +  + G
Sbjct: 386 ----------VMPGVSYSYLRSDNRIDPHNGYRLQFDTKVAKEGLGSDTNLLYGTALVKG 435

Query: 576 YYPISDSFVLAARTKIGTINGVARDDVAPSRRIYAGGGGSVRGYGYQELGPKDANNDPIG 635
              + D+    AR ++G         V PS R +AGG  SVRGY YQ L P++   D +G
Sbjct: 436 LTTLWDNHRFLARAQVGGSATNGYKSVPPSLRFFAGGDQSVRGYEYQTLSPENDRGDRVG 495

Query: 636 GRSVNEFAVEGRYRFG-NYGVVAFVDAGQVYESQIPQFSDIRYGVGLGGRFYTNFGPFRA 694
           GR +   + E +Y     + +  F+D G  + +       ++ GVG+G R+ +  GP R 
Sbjct: 496 GRYMVALSAEYQYSIAEKWRIATFIDQGNSFNNL--DLPSLKTGVGVGIRWVSPVGPIRL 553

Query: 695 DIAMPINRQPGESKFALYIG 714
           D+A  +   PG  +    +G
Sbjct: 554 DLAHAL-EDPGGIRLHFSMG 572