Pairwise Alignments

Query, 313 a.a., Transcriptional Regulator, LysR family from Sphingobium sp. HT1-2

Subject, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 3e-29
 Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 16/301 (5%)

Query: 6   HFDLNSLVILGLLLRTKSVTRTAQQLGVSQPSVSRSLAQLRSLLGDPLLVRTAGGMELTR 65
           H DLN LV L +LL  +++TR A++L ++Q + S  L +LR+   D LLV+    M+ T 
Sbjct: 5   HLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQPTP 64

Query: 66  RAEELAPSLQDWLAT-TAGLLEPPRFDPATLDRRFRVASTDFGVAAVVAPTLPHIGRAAP 124
            A ELA  +++ L T  A +   P FDPA   R FR+ ++D+ ++ V A  +  I + AP
Sbjct: 65  YALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQEAP 124

Query: 125 LAAIDIVPLTGDMVARLTAGEIDLIISG----LDPDPAQTYERFLFTETFSCVVDRHH-K 179
               +++         L  GE+D++I      ++  PAQ     LF E   CVV R + +
Sbjct: 125 QITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQ----LLFEEDHVCVVWRDNPE 180

Query: 180 LAAHPTDRPLSVEDFLSCPHISFVVSDSGFDRIE-LRLGALAPRRRVIARLPYFQAAPHM 238
           +  H     L++E ++   HIS     +    IE   +      RR+      F   P +
Sbjct: 181 VGEH-----LTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQL 235

Query: 239 IRGSDALMTLPTRAAEAIARTHDLACLPAPDLVGTFGYRLLWNERSHRDPAIAWLCDMFA 298
           + G+  + T+  R AE  A    L  LP P  +      +LW+     DP   WL +  +
Sbjct: 236 LVGTVRVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERIS 295

Query: 299 D 299
           D
Sbjct: 296 D 296