Pairwise Alignments

Query, 468 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  317 bits (813), Expect = 4e-91
 Identities = 187/467 (40%), Positives = 273/467 (58%), Gaps = 10/467 (2%)

Query: 6   RIGGAGVTLAAVLLAGCSMAPAYQPPQ-TSAPAEYKEVAGWTAAQPADATPRGNWWEAFN 64
           R+ GAG+ +A  LL+ C+++P Y  P+  S  A++K   GWT A P+DA  RG WWE + 
Sbjct: 22  RLLGAGLCVA--LLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYG 79

Query: 65  DPVLNDLESRAEQASPTLAAALARYDQARAAARVENADLFPQI----SAGADAGHRRVSG 120
           D  LN L     +++ T+A + A+Y QA+A  R   A LFP +    S    A     S 
Sbjct: 80  DAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSS 139

Query: 121 NRFQGNGSAVTYNDYVVGGSLDYELDLWGRIRNSVKAARADADASNADLASARLSLQAAV 180
           +    N S +  N Y     + +E+DLWG++R ++ A  A A+AS ADLAS RLS Q+ +
Sbjct: 140 SSLSNNSSGIR-NTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSEL 198

Query: 181 ADAYARLRGLDAQAELLHQTVEAFGKAYDLTDRRHKGGVSSGIDVNRAKTVLDNAKADIS 240
              Y +LR +D Q  LL  TV A+ ++  + + +++ GV+    V +A+T L + +AD+ 
Sbjct: 199 VQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLI 258

Query: 241 AIANERAATEHEIAALVGAIASDFSIAARTQPLAAPDVPTGAPSQLLERRPDIAAAERRM 300
            +  +RA  E+ IA L+G   +DF++A      A P +P   PSQLLERRPDIAAAER +
Sbjct: 259 DLIWQRAQFENAIAVLLGKAPADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNV 318

Query: 301 FAANARIGVAKAAFFPTLTLGLTGGW-ETTHGDLFSAPNSFWGLGPASALLNLFDGGKRR 359
            AANA IGV++AA+FP L+L ++GG+  ++  +    PN +W +GP  A L LFD GKR 
Sbjct: 319 MAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLA-LTLFDAGKRS 377

Query: 360 AQVKMSRAEYEELAAGYRDTVLTAFRQVEDAVAANHHLSDQIGHQRSAADAAQRTSDLAL 419
           A+V  + A Y++  A YR TVL  FR+VE+ +       D+   ++ A DAA+ +  L  
Sbjct: 378 AEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTE 437

Query: 420 TRYRDGASDYLEVVTAQTDALDAQRAVLIAQTQRMRASVALAKALGG 466
            +YR G   YL+VV  QT AL  +R+VL     R+ ASV L  ALGG
Sbjct: 438 NQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGG 484