Pairwise Alignments

Query, 401 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score =  103 bits (256), Expect = 1e-26
 Identities = 107/400 (26%), Positives = 166/400 (41%), Gaps = 43/400 (10%)

Query: 21  KKIGIGAAVVALAVVGVGVASRISATNELRETAADASVPTVAVVKPTMNGEGNDLVLPGN 80
           +++ I  AVV L V+ +G     S   +++   A     TVA            L   G+
Sbjct: 25  RRMLIMLAVVLLIVLALGGYKAFSIYQQIQMFTAPKPPITVAAAMAEQRPWQERLPAVGS 84

Query: 81  VQAYNSAAIYARTNGYVRRWLADIGDRVRAGQPLAVLDAPDLDQQVAAAQADYQTALANQ 140
           ++A     +     G V+    D G +V+AGQ L  L+    DQ+ A       TALA+ 
Sbjct: 85  LKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLND---DQETALLG----TALADL 137

Query: 141 RLAETTSKRWSAMLAQDAVSRQEADEKAGDLAARTAVSNAALANVKRLKAQQGFTRLAAP 200
            LA+    R S ++   A+SR E D  +       AV       V++LKAQ+   R+ AP
Sbjct: 138 GLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAV-------VEQLKAQKIKKRINAP 190

Query: 201 FDGVVTSRSAQIGALVVSGNAAAQPLFTVSDIHRMRIYVRVPQGYSASVRPGMGATLTLP 260
           F G +  R   IG  + +G   A    T+ D   + +   VP+     +  G    + + 
Sbjct: 191 FSGTIGIRQVDIGQYLAAGTVIA----TLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVA 246

Query: 261 EYPGRSFNATLTSSSGAVDAQSGAVLVQLQAENPDGALKPGAFAQVSFKVGAGQGNGMTL 320
            YPG+ F  +L++ +  V+  +  +LV+    NPDG L PG FA +   +   Q   + +
Sbjct: 247 AYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQ-VVV 305

Query: 321 PGSAILYSNNGPSVAVVGADNRITMKP----------------VAIARDEGATVQIASGL 364
           P SAI Y+  G SV V         KP                V         V ++ GL
Sbjct: 306 PESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGL 365

Query: 365 SPNDRIVD------TPPDAIRTG--DTVKVQASAPAGGKG 396
              +++V       TP  AIR G  + +K +  A A   G
Sbjct: 366 QAGEQVVTAGQLKLTPGAAIRIGQDNALKPEPGAAAKDSG 405