Pairwise Alignments

Query, 1064 a.a., CzcABC family efflux RND transporter, transmembrane protein from Sphingobium sp. HT1-2

Subject, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score =  354 bits (908), Expect = e-101
 Identities = 284/1053 (26%), Positives = 493/1053 (46%), Gaps = 57/1053 (5%)

Query: 9    LHRPLTFIVMAILIAIVGILSAARTPVDMFPNIRIPVIAVAFQYAGLSPEDMSGRIVGPY 68
            + RP+   V+++LI ++G  +  +  +  +P +   +I V   Y G + E + G I  P 
Sbjct: 8    IQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPL 67

Query: 69   ERVLTTTVNDIEHIESQSLQGIGVIKIYFQPGADIRTATAQVTSISQTVLRQMPPGVTPP 128
            ++ L +    I+++ S S Q   +I IY + GAD      ++ + +  V  ++P     P
Sbjct: 68   QQSLASA-EGIDYMTSVSRQNFSIISIYARIGADSDRLFTELLAKANEVRNKLPQDSEDP 126

Query: 129  LILNYSASTVPILQLALSGKGLSEQQLFDLGQNQIRPQLVTIPGLAMPFPSGGKQRQVQI 188
            ++   +A    ++ ++   K +S  Q+ D     I+P+L T+PG+A     G +   +++
Sbjct: 127  VLSKEAADASALMYVSFYSKEMSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFAMRL 186

Query: 189  DLNPLALQSKGLSAQDVGNAIAAQNQINPAGFVKIGATQYSVRLNNAPESIAALNDLPVK 248
             L+P+ L   GLSA DV NA+   N ++ AG VK      SV  +   +S  A   LP+K
Sbjct: 187  WLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKGEYVVTSVNASTELKSAEAFAALPLK 246

Query: 249  VVNGATIYMRDVAYVRDGAGPQQNIVHVEGSRSALLTVLKNGSTSTLAIVDGVKQALPKI 308
                + + + DVA V  GA     +   +G+ S  + +    + + L ++  V++ +P++
Sbjct: 247  TSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVRRIMPEL 306

Query: 309  SATLPDTLKILPIGDQSLFVKAAVEGVIHEGAIAAALTSLMILLFLGSWRSTVIIALSIP 368
             + LP  L +    D + F++A+++ VI     A  +  +++ LFLG+ RS +I  ++IP
Sbjct: 307  ESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIP 366

Query: 369  LAILAAIAALAMFGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKGVIEAILDG 428
            L+++  +  + M G +LN++TL  + LA+G++VDDA V +ENI+ H+E+GK   +A L+G
Sbjct: 367  LSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPFDAALEG 426

Query: 429  AAQIVTPAFVSLLCICIVFVPMFFLPGVAGFLFVPMALSVVFAMIASFILSRTLVPTMAM 488
            A +I  P     + +  V+ P+ FL G+ G LF   AL++  A+I S I++ TL P M  
Sbjct: 427  AREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLSPMMCA 486

Query: 489  YLLKPHHVGDEDEHLAGTATSRNPLVSFQRGFEYRFEKVRTSYVGMLHRALGARKPFLIG 548
             LL+       +++ +G A   + L          FE+++  Y  +LH  L +R   L+ 
Sbjct: 487  LLLR------REQNPSGLAHRLDQL----------FERLKGRYQRLLHATLDSRPVVLVF 530

Query: 549  FMAVVVLSFGLLPFLGSNFFPSVDSGQIAMHIRVPVGARIEDTAARFDQIGREVRKIIPA 608
             + ++ L   LL F  +   P+ D G I M    P  A ++   A  DQ    + K  P 
Sbjct: 531  AVIILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQF-TPLFKAFPE 589

Query: 609  DQLGSITDNIGLPVSSINTVYNNSGTIGPQDGDMLIALNKGHRPTDEFVSQLRRELPRRF 668
                         ++  N V    G      G +L   N+  R   E +  ++ +L    
Sbjct: 590  YY-------SSFQINGFNGVQTGIG------GFLLKPWNERERTQMELLPLVQAKLEEIS 636

Query: 669  PGTTFAFLPADITSQILNFGAPAPIDIQIAGKDAEANRAYAQKLLAKITTIPGLADARIQ 728
                F F    +       G P    I  AG D  A    AQ++  +       A   I 
Sbjct: 637  GLQIFGFNLPSLPG--TGEGLPFQFVINTAG-DYPALLDVAQRIKTRAQESGKFAFLDID 693

Query: 729  QPGRAPQLDVDVDRSRVGQYGLTERDVTTSLASSLAGTSQTAPVFFVNPQNGVQYPVVAQ 788
                 P++ VD+DR++  Q G++   +  +LA+ L                G  Y V+AQ
Sbjct: 694  LAFDKPEVVVDIDRAKAAQMGVSMDTLGGTLATLLGEAEINRFTL-----EGRSYKVIAQ 748

Query: 789  APEYLVGSMSDLSNVPVSGAGASAVQPLGGLATI---VRSNTVPVVSHYNIAPVLDIFAT 845
                   +   L+N  V       + PL  L T+    R   +      N A +  +   
Sbjct: 749  VERPYRDNPGWLNNYYVKN-DQGQLLPLSTLITLTDRARPRQLNQFQQLNAAIIQGVPMV 807

Query: 846  TQGRDLGAVAGDIDRAIKSLKAEEPKGSTITIRG---QYATMNTAFSGLGFGLAGAIILI 902
            + G  L  V  DI R       E P+G      G   QY    +A   + FGLA AI  I
Sbjct: 808  SLGEALKTVQ-DIAR------EEAPEGFAFDYAGAARQYVQEGSAL-WVTFGLALAI--I 857

Query: 903  YLLIVVNFQSWVDPFVIITALPAALAGIIWMLFMTGTTLSVPALTGAIMCMGVATANSIL 962
            +L++   F+S+ DP VI+  +P ++ G +  LF+  +++++    G +  +G+ + + IL
Sbjct: 858  FLVLAAQFESFRDPLVILVTVPLSICGALLPLFLGVSSMNIYTQVGLVTLIGLISKHGIL 917

Query: 963  VVSFARERLAELGDATKAAL-EAGMVRFRPVLMTALAMIIGMGPMALGLGEGGEQNAPLG 1021
            +V FA +   E G + + A+ EA  +R RPVLMT  AM+ GM P+ L  G G      +G
Sbjct: 918  IVEFANQLRDERGLSVREAIEEAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIG 977

Query: 1022 RAVVGGLICATIATLFFVPTVFAFVHSRKAAKA 1054
              +  G+   T+ TLF +P ++  +  + +AKA
Sbjct: 978  MVIATGMSIGTLFTLFVLPCIYTLLAHKASAKA 1010