Pairwise Alignments

Query, 468 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

Subject, 477 a.a., Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system from Variovorax sp. SCN45

 Score =  261 bits (667), Expect = 4e-74
 Identities = 168/458 (36%), Positives = 237/458 (51%), Gaps = 7/458 (1%)

Query: 10  LGASALTACAAGPDYKAPA-TPTTAAAPFIGAASPAVAQSAADDHWWRLYNDPLLDGLVG 68
           L    L  CA GP Y AP+  P   +AP         A  A    WWR  +DP LD L+ 
Sbjct: 13  LSLLVLAGCAVGPKYTAPSDAPVAISAP----ERSLFAGDAVQRDWWRQLDDPQLDALID 68

Query: 69  DALKANTDIRVAVARLERARAQLRGARSDRLPSTNISGSPTYGRVSQAQTL-PGMDRENW 127
            AL  N +IR+A ARL  ARA    A  DRLP    S S T G       L P +   + 
Sbjct: 69  RALAENHEIRIAQARLLEARATQTEAELDRLPVVTASASKTRGIAQGNDGLQPDVRSLSQ 128

Query: 128 TVDMGLDVAYEVDLFGRVKRSIEAARGDVGAAEADADAVRVAVVADTVRAYVDATASAQR 187
           +   G D ++E+DLFGR+KR  EAA     A+ AD + VR+  VA+  R Y +   + QR
Sbjct: 129 SSRAGFDASWEIDLFGRLKRLDEAATARAEASAADLEQVRIVAVAELARNYYEMRGAEQR 188

Query: 188 LAVAKETVDLLDKSIRITSARFDAGRSDRLDVIRVTTLREQQQALIPNLVADRNAALFRL 247
           +AV + T+D L +S+R+T A+   GR    D+          ++ +P L   R  + +R+
Sbjct: 189 IAVTRRTLDSLRQSLRVTEAQVRTGRGLEGDLASAQANLATTESQLPALETARRQSAYRV 248

Query: 248 ATLTGRTPQELPASVQNATVTPNVTQPIPVGDGQALLARRPDVRAAERRLAADTARVGVA 307
           A L G  P EL   ++   +   + + +P+GD   LL RRPDV  AER LAA TA VG  
Sbjct: 249 AVLAGLRPAELEPMLRPQPLRV-LDKRLPIGDMADLLRRRPDVLRAERGLAASTADVGAV 307

Query: 308 TADLYPRITLGGSIGTTAVGGGNLFGAGPLNFLLGPLISWAFPNQEANRAKIAAAKADGD 367
           TA+LYPR  +GG +G  A+ G +L  +    F + P +SW      + +A++  A+A   
Sbjct: 308 TAELYPRFDIGGFLGFIALRGSDLGSSSSRAFSVTPGVSWPALRLGSVKARVRGAEARAQ 367

Query: 368 ASLAAFDGTVLQALEETETALSTYANALERRATLQSARDEAARAARISLARQREGQIDFL 427
              A ++ TVL+A+E+ E AL+ Y     R   L  A   + RAA ++  R REG   +L
Sbjct: 368 GDRALYEQTVLRAIEDVEGALTGYGQNQLRLQRLVEASARSGRAAELAEVRYREGAAPYL 427

Query: 428 TVLDALRTQASADADLATANRSVAFAQVDLFRALGGGW 465
           +VLDA RT   A   +A A  +   + V L++ALGGGW
Sbjct: 428 SVLDAQRTLLRAQDAVAEAETASYTSLVALYKALGGGW 465