Pairwise Alignments

Query, 468 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  182 bits (463), Expect = 2e-50
 Identities = 144/479 (30%), Positives = 229/479 (47%), Gaps = 27/479 (5%)

Query: 1   MTRNLIALLLGASALTACAAGPDYKAPATPTTAAAPFIGAASPAVAQ--SAADDHWWRLY 58
           MT++L++L + A  L  C+  PDY+ P  P  A  P   A SP  +   +AA+  W + +
Sbjct: 1   MTKSLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFF 60

Query: 59  NDPLLDGLVGDALKANTDIRVAVARLERARAQLRGARSDRLPSTNISGSPTYGRV--SQA 116
           +DP L  L+  +L  N D+RVA   L+  RAQ R  R+D  P+ + +GS +  RV  + +
Sbjct: 61  HDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMS 120

Query: 117 QTLPGMDRENWTVDMGLDVAYEVDLFGRVKRSIEAARGDVGAAEADADAVRVAVVADTVR 176
           QT        ++  +G+  AYE+DLFGRV+   E A     ++E    + ++A+VA    
Sbjct: 121 QTGESGITSQYSATLGVS-AYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVAN 179

Query: 177 AYVDATASAQRLAVAKETVDLLDKSIRITSARFDAGRSDRLDVIRVTTLRE-------QQ 229
           AY    A      + +ET+   ++S  +T    + G +  LDV +  T  E       Q 
Sbjct: 180 AYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQY 239

Query: 230 QALIPNLVADRNAALFRLATLTGRTPQELPASVQNATVTPNVTQPIPVGDGQALLARRPD 289
           Q L+     D N+    L T     P +L   ++   +  +    +P G    +L RRPD
Sbjct: 240 QRLVAQ---DVNSLTVLLGT---GIPADLAKPLE---LDADQLAEVPAGLPSDILQRRPD 290

Query: 290 VRAAERRLAADTARVGVATADLYPRITLGGSIGTTAVGGGNLFGAGPLNFLLGPLISWAF 349
           ++ AE  L A  A +G A A  +P I+L  + G+ +   G+LF  G   +L  P I+   
Sbjct: 291 IQEAEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPI 350

Query: 350 PNQEANRAKIAAAKADGDASLAAFDGTVLQALEETETALS---TYANALERRATLQSARD 406
            N  + +A +  +K   D ++A ++ T+  A +E    L+   T+   L+ +  L  A  
Sbjct: 351 FNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQ 410

Query: 407 EAARAARISLARQREGQIDFLTVLDALRTQASADADLATANRSVAFAQVDLFRALGGGW 465
           +  R A     R R G    LT LDA R   SA   L     S   ++V+L++ALGGGW
Sbjct: 411 DYYRLAE---RRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466