Pairwise Alignments

Query, 1062 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1059 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

 Score =  786 bits (2030), Expect = 0.0
 Identities = 432/1040 (41%), Positives = 639/1040 (61%), Gaps = 9/1040 (0%)

Query: 4    SRFFIDRPIFAAVIAVVITVVGALAFVGLPVSQYPDIVPPTVTVSAQYPGASAETVASTV 63
            +R+FIDRPIFA VIA+VI + G LA   LPV+Q+P+I PP VT+   YPGA+A+T+ ST 
Sbjct: 2    ARYFIDRPIFAWVIAIVIMLAGLLAIRSLPVAQFPEIAPPAVTIQTTYPGANAQTLESTT 61

Query: 64   AAPIEQEINGVDDMLYQSSQSTGDGKVVITVTFKIGTDLDAAQVLVQNRVAVAIPRLPEE 123
               IEQ++ G+D++ Y SS S G G + IT+TF+ GTD D AQV VQN+++ A P LP+E
Sbjct: 62   TQIIEQQLKGIDNLRYFSSTSDGSGNLNITLTFEQGTDPDIAQVQVQNKLSQATPLLPQE 121

Query: 124  VQRLGVVTRKTTPEFLMVVNLQSPDGTYDRDYISNYALTQVRDRLARLDGVGDVQLFGSR 183
            VQ+ G+   K+T  FL+++   S DG +D++  +++  + ++D L+R+ GVGD QLFGS+
Sbjct: 122  VQQQGLRVGKSTSSFLLIMAAYSDDGIHDQEDAADFIASSLQDPLSRVTGVGDTQLFGSQ 181

Query: 184  DYAMRIWIDPDRAAALDLTAGEIVSALRAQNVQVSAGSIGQPPYDRGEAFQLGVEMQGRL 243
             YAMRIW+DP + A L +T G++ SA+ AQN QVSAG IG  P  +G+A    V  Q RL
Sbjct: 182  -YAMRIWLDPYKMANLGVTTGDVKSAITAQNAQVSAGQIGGSPSPKGQALNATVTAQSRL 240

Query: 244  TTPDQFSDIVIRSDADGHQVRVRDVARVELGAQDYGTNTYLSNKPTVVIATMQRPGSNAL 303
             TP++F +I +RS++DG  V ++DVA+VELGA+ YG     +  P         PG+NAL
Sbjct: 241  RTPEEFQNIRLRSNSDGSVVLMKDVAKVELGAETYGFGVKFNGHPASGFGIKLAPGANAL 300

Query: 304  DAAEKVKAEMEQLSKRFPKGLEYSIIYNPTEFISQSIDAVYHTLFEAVILVVIVILIFLQ 363
            D  E VKA ++QLSK FP  ++Y    + + F+  S++ V HTLFEAV+LV +V+ +FLQ
Sbjct: 301  DTVEAVKARVDQLSKNFPSWVKYDFPVDNSTFVKLSVEQVVHTLFEAVLLVFVVMFLFLQ 360

Query: 364  NWRAAVIPIIAIPVSLIGTATMLAAVGYSLNNLSLFGLVLAIGIVVDDAIVVVENVERNI 423
            NWRA +IP IA+PV L+G   +L+A G+++N L+LFG+VLAIG++VDDAIVVVENVER I
Sbjct: 361  NWRATLIPTIAVPVVLLGALAILSAAGFTINTLTLFGMVLAIGLLVDDAIVVVENVERLI 420

Query: 424  EN-GMSPLQAARVSMDEVSTALIAIVLVLCAVFVPTLFITGISGAFYQQFAVTISTATVI 482
            ++ G+SP +AA+ SMDE+S ALI I LVL AVF+P  F  G +G  ++QF++TI ++ ++
Sbjct: 421  QDEGLSPKEAAKKSMDEISGALIGIGLVLSAVFLPMAFFGGSTGVIFRQFSITIVSSMIL 480

Query: 483  SLILSLTLSPAAAALLLKSKHGAHDLDNAPRWRQVAAKAADRFNQGFDRMSAGYARLTRF 542
            S++++L L+PA  A +LK     H   N P    +  +  D FN+ FD+    Y +    
Sbjct: 481  SVLVALILTPALCATILKPASHGHSW-NGP-IGSILGRFFDWFNRTFDKGVVRYGKGVEK 538

Query: 543  LVARPKKMLLTYAGLIAATIALFWVTPGGFIPAQDQGYFLAVVQLPSGASLERTDKVTRE 602
            +     + +L Y  ++     +F   P GF+P +DQG  +  V LP+G +LE T++    
Sbjct: 539  VERSWVRTMLVYGLVVVGMAFIFLRLPSGFLPDEDQGIIINQVSLPAGTTLEETERALAR 598

Query: 603  VAAKIL--PIKGLRGAVMFAGFHGPSQTQAPNSAAIYFPFKSFAERKAEGATYAGIMDQA 660
            +    L    K +      AGF    Q Q  N   ++   K + ER         I  +A
Sbjct: 599  MRDHYLVDEKKNVSAVFTVAGFGFVGQGQ--NVGIVFARMKDWHERSGADNRVPAIALRA 656

Query: 661  NKAVAGYDKARILLVPPPLIQGIGSAGGYRLMLEDREDRGYAELNKVAGELIGKANQSPS 720
            N A             PP +Q +G+A G+   L D+ + G+ +L +   +L+G A     
Sbjct: 657  NMAFQKISSGMAFAFVPPAVQELGNASGFDFQLLDQANLGHEKLLEARNQLLGMAMGDKR 716

Query: 721  LAQVYTLFDVGTPRIFADVDRRKADLLGVPPERVFEAMQVYLGSAFVNDFNLLGRTYRVT 780
            LAQV       TP++  +VD+  A  LG+    V + +   LG ++VNDF    R  RV 
Sbjct: 717  LAQVRPNGLEDTPQLKLNVDQAAAGALGIAQSDVNDTISTNLGGSYVNDFIDRDRVKRVY 776

Query: 781  AQADAEHRGTVADIANLKTRSNSGQMVPIGSVSTFRDKTGPYRVVRYNLLPAVEIDGDTA 840
             QADA  R +   I     R ++G M P+ + ST     GP R+ RYN +P++ I G  A
Sbjct: 777  VQADAPFRTSADAINAYHVRGSTGVMAPLSAFSTTEWVQGPARLERYNGVPSMNIQGAPA 836

Query: 841  PGYSSGQSLSTMEKLADAAPAGYASEWTGVAYQQISAGNTAGIVFGMAVFFVFLVLAAQY 900
            PG SSG ++  ME+ A   PAG    W G++Y++ ++G  A  V+ +++  VFL LAA Y
Sbjct: 837  PGVSSGTAMQAMEEFAAKLPAGIGYAWNGISYEEQTSGGQAPYVYALSMLIVFLCLAALY 896

Query: 901  ESLTLPLSIILIVPMCLFAAMLGVNLRGMDNNILTQIGLVVLIALAAKNAILVVEFAKQA 960
            ES ++P++++L+VP+ +  A++   L G++N+I  Q+GL+  I ++AKNAIL+VEFA++ 
Sbjct: 897  ESWSVPIAVMLVVPLGVLGAVIAATLAGLNNDIYLQVGLITTIGVSAKNAILIVEFAEEK 956

Query: 961  EEEQGLSPVEAAVQAAQTRLRPILMTSFAFILGAVPLVIASGAGAELRQALGTAVFFGMT 1020
              E GL P +AA++A + RLRPILMTSFAFI G +PL ++ GAGA  + A+G AV  GM 
Sbjct: 957  MRE-GLPPAKAALEAGKLRLRPILMTSFAFIFGVLPLAVSKGAGAGGQNAIGWAVVGGML 1015

Query: 1021 GVTAFGLLFTPTFYVVCRAL 1040
              T   + F P F+ V + L
Sbjct: 1016 SATVLAIFFVPVFFTVVKRL 1035