Pairwise Alignments

Query, 380 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Sphingobium sp. HT1-2

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  297 bits (760), Expect = 4e-85
 Identities = 158/374 (42%), Positives = 233/374 (62%), Gaps = 3/374 (0%)

Query: 6   LTDEQRAVQELAQRFTADAITPHAAKWDEDHHFPRDTIRQAAELGFGAIYVSEESGGIGL 65
           + DEQ+ + +  + F  + + P A +WD+DH FP++ I + AELG   + V E+ GG   
Sbjct: 3   VNDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDT 62

Query: 66  GRLESALIMEAMAYGCPSTSAFISIHNMAAWM-IDRFGDEAVKQRYLPSLVTCETIASYC 124
           G +  A+ +E +A G  + S  +S+HN    + I RFG+E  K+++L  L T   + ++ 
Sbjct: 63  GYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFA 122

Query: 125 LTEPSAGSDAASLRTRAVLDGDHYVVTGSKAFISGGGENDIYVVMVRTG-EDGPKGISCL 183
           LTEP AGSDA+SL+TRA L+GDHYV+ GSK FI+ G    + +V   T  E G +GIS  
Sbjct: 123 LTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAF 182

Query: 184 VIEKNMEGVSFGAQERKLGWHSQPTAQVNFDGVRVPVANRVGAEGQGFAIAMAGLDGGRL 243
           ++  +  G      E KLG H+  T Q+ FD V+VPVANR+GAEG+G+ IA+A L+GGR+
Sbjct: 183 IVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRI 242

Query: 244 NIGACSLGGAQRALDEAVGYTRDRRQFDRAIADFQNTQFTLADMETELQAARSLLYLAAA 303
            I + ++G A+ A + A  Y  +R+ F + + + Q   F LADM T++  AR ++  AAA
Sbjct: 243 GIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAA 302

Query: 304 KVSEGAPDKTKFAAMAKRFATDTGSAVADRALQLHGGYGYLMDYPVERIWRDLRVHRILE 363
               G P   + A+MAK FA++    V   ALQ  GGYGYL D+P+ERI+RD+RV +I E
Sbjct: 303 LRDAGRPALVE-ASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYE 361

Query: 364 GTNEIMRMITAREL 377
           GT++I RM+ AR L
Sbjct: 362 GTSDIQRMVIARNL 375