Pairwise Alignments

Query, 749 a.a., Two-component system sensor histidine kinase from Sphingobium sp. HT1-2

Subject, 1159 a.a., putative Sodium-solute symporter/sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  339 bits (870), Expect = 4e-97
 Identities = 229/601 (38%), Positives = 318/601 (52%), Gaps = 57/601 (9%)

Query: 181  ADGRWIQINELRTSEGGIVGIYTDITEAKA---------EDARARARELAE----RNVVL 227
            ADG WI+  E   +  G++G  +     KA         ED    A E +E       +L
Sbjct: 581  ADGDWIEHTERLLA--GVLGTSSTRAVVKAAIEGRDMQLEDVVRIADEASEVLQFNRALL 638

Query: 228  QSTLDNLSEGVCVFDGSGQLAAWNDALRRLLALPENFAGALGSHAELQRWCRET------ 281
            Q  ++N+++G+ V D +  L AWN     L   P+         A++ R+  E       
Sbjct: 639  QGAIENINQGISVVDQNLHLVAWNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPG 698

Query: 282  -LAMDDQGCLDW-RGGGADQQAMVCLCTAGERHFELRSNAMADGGQVFGFTDVTDMLRAQ 339
               +     L W R G A     +       R  EL  N M  GG V  FTD+T    A+
Sbjct: 699  EAQVHVARRLHWMRQGRAHSSERLF---PNGRVIELIGNPMPGGGFVMSFTDITPFREAE 755

Query: 340  ASLQETAETLERRVSERTGELVDLNRKLEGEVAERRAIEAALIDAKIVAEKANLSKTRFL 399
             +L++  E LE+RV+ERT EL  LN+              AL +AK  AE  + SKTRFL
Sbjct: 756  QALRDANERLEQRVAERTHELSQLNQ--------------ALSEAKSQAEAVSNSKTRFL 801

Query: 400  AAASHDLLQPLNAARLFVAALGDRRLAL--PTRALVNQTSTALDSVEDLLEALLEISRLD 457
            AA SHDL+QPLNAARLF AAL  +   +    R LV    ++L S E+L+  LL+ISRL+
Sbjct: 802  AAVSHDLMQPLNAARLFSAALSQQAEGMNEEARQLVQHMDSSLRSAEELISDLLDISRLE 861

Query: 458  AGAIQPEIGPFRIDRLLQTLNVEFAPMARSAGLAFRIEAQPLWVETDLRLLRRILQNFIS 517
             G I P+  PF ++ L  TL  EF  +A   GL FR+    L V++D++LLRR+LQNF++
Sbjct: 862  NGKITPDAKPFALNELFDTLGAEFKLLAAEKGLEFRLRGSRLRVDSDMKLLRRVLQNFLT 921

Query: 518  NAIRYTPRGTVSVACIQHDDRVEISVTDSGPGIAPEQQALIFEEFRRLDTRS----QGKG 573
            NA+RY  +  + +   +  +R+ + V D GPGIA ++  +IF+EF+RLD+      +G G
Sbjct: 922  NALRYG-KSPILLGARRQGERLWLEVWDRGPGIADDKLQVIFQEFKRLDSHQTRAEKGLG 980

Query: 574  LGLAIVKRASDMLGHPISLRSQPGQGATFAIALPIGQ-----PQREEDGDTGQPTRDRSM 628
            LGLAI      +LGHP+ +RS PG+G  F +++PI +     P    +   GQP     +
Sbjct: 981  LGLAIADGLCRVLGHPLEVRSWPGKGTVFRVSVPIARQAAAAPSTPVEQQGGQP-----L 1035

Query: 629  RDLSVLVVDNEKQIQSGMRTLLTGWGCSVVTADGYDQAAALFADGRRPDIILVDYHLKDG 688
              L VL VDNE  I  GM +LL+ WGC V TA    +  AL A G RP + LVDYHL DG
Sbjct: 1036 AGLQVLCVDNEDSILIGMNSLLSRWGCQVWTARNQAECEALLAKGMRPHLALVDYHLDDG 1095

Query: 689  ETGDTVITRLHDHFGVRIPAVMISADRGEPLKTQLAAANIPLLNKPVKPAQLRALLRTML 748
            ETG  ++  L    G  +P V+ISAD  +     + A+ +  L KPVKPA LRALL   L
Sbjct: 1096 ETGTGLMGWLRARLGEPVPGVVISADGSKETIALVHASGLDYLAKPVKPAALRALLNRHL 1155

Query: 749  A 749
            +
Sbjct: 1156 S 1156



 Score = 51.2 bits (121), Expect = 3e-10
 Identities = 67/254 (26%), Positives = 104/254 (40%), Gaps = 23/254 (9%)

Query: 33  DRVERSTDMSANAFSMFETAISLEAKVRDRTLQLEDALGRLAKANADLAEAHADADAAQV 92
           D +E +  + A       T   ++A +  R +QLED + R+A   +++ + +      + 
Sbjct: 584 DWIEHTERLLAGVLGTSSTRAVVKAAIEGRDMQLEDVV-RIADEASEVLQFN------RA 636

Query: 93  RLRDAIESINEGFVLFDAEDRLILYNEAYLGFWPQVAERLDQNLTFHDIARIAAHSQ--G 150
            L+ AIE+IN+G  + D    L+ +N  YL  +      +       DI R  A     G
Sbjct: 637 LLQGAIENINQGISVVDQNLHLVAWNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCG 696

Query: 151 PAGAQVAPDRWVSDRLAKHGIADGGQVQRLADGRWIQINELRTSEGGIVGIYTDIT---- 206
           P  AQV   R +     + G A   + +   +GR I++       GG V  +TDIT    
Sbjct: 697 PGEAQVHVARRL--HWMRQGRAHSSE-RLFPNGRVIELIGNPMPGGGFVMSFTDITPFRE 753

Query: 207 -EAKAEDARARARE-LAERNVVLQSTLDNLSEGVCVFDGSGQ-----LAAWNDALRRLLA 259
            E    DA  R  + +AER   L      LSE     +         LAA +  L + L 
Sbjct: 754 AEQALRDANERLEQRVAERTHELSQLNQALSEAKSQAEAVSNSKTRFLAAVSHDLMQPLN 813

Query: 260 LPENFAGALGSHAE 273
               F+ AL   AE
Sbjct: 814 AARLFSAALSQQAE 827