Pairwise Alignments

Query, 749 a.a., Two-component system sensor histidine kinase from Sphingobium sp. HT1-2

Subject, 1169 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  336 bits (861), Expect = 5e-96
 Identities = 220/553 (39%), Positives = 301/553 (54%), Gaps = 33/553 (5%)

Query: 209  KAEDARA-------RARELAERNV-VLQSTLDNLSEGVCVFDGSGQLAAWNDALRRLLAL 260
            KAED  A       +A E  + N  +LQ+ L  + +G+ VFD S QL  WN   R LL L
Sbjct: 621  KAEDTSADTAWLLDQASEALQYNQDMLQTALAQMDQGIAVFDSSQQLTIWNRRFRTLLDL 680

Query: 261  PENFAGALGSHAELQRWCRETLAMDDQGCLDWRGGGADQQAMVCLCTAG-ERHFELRSNA 319
            PE F        E+    +E   M      +             L  AG ER  E+RSN 
Sbjct: 681  PEQFGQVGVPLTEIVTMLQERGDMPPGDTDELITSFLTMDLPFSLVLAGGERIIEVRSNT 740

Query: 320  MADGGQVFGFTDVTDMLRAQASLQETAETLERRVSERTGELVDLNRKLEGEVAERRAIEA 379
            M D G V  FTD+T  + +  +L++  ETLE+RV ERT EL  +NR              
Sbjct: 741  MPDKGIVATFTDITQRVASDQALKQANETLEQRVEERTVELTRVNR-------------- 786

Query: 380  ALIDAKIVAEKANLSKTRFLAAASHDLLQPLNAARLFVAALGDRRLALPTRALVNQTSTA 439
            AL +A+  A++AN+ KTRF AAA HD+LQPLNAARL+ ++L +R  A     LV+   +A
Sbjct: 787  ALAEARASADEANIGKTRFFAAAGHDILQPLNAARLYSSSLVERLGASGESDLVHNIDSA 846

Query: 440  LDSVEDLLEALLEISRLDAGAIQPEIGPFRIDRLLQTLNVEFAPMARSAGLAFRIEAQPL 499
            L+SVE +L A+L+ISRLD G+++  +    ++ LL+ +  +FAPMA+   L   +    L
Sbjct: 847  LESVETILGAVLDISRLDTGSMKARMTSVPLNELLKRIETDFAPMAQEKNLDLVVMPTSL 906

Query: 500  WVETDLRLLRRILQNFISNAIRYTPRGTVSVACIQHDDRVEISVTDSGPGIAPEQQALIF 559
             V +D  LLRR++QN +SNAI+YT  G V V   +    V I VTDSG GI   +   +F
Sbjct: 907  TVRSDPNLLRRLIQNLVSNAIKYTLEGKVVVGARRRGGEVVIQVTDSGIGIPASKFRTVF 966

Query: 560  EEFRRLD---TRSQGKGLGLAIVKRASDMLGHPISLRSQPGQGATFAIALPIG----QPQ 612
            +EF RLD     + G GLGL+IV R S ML HP+ L S PG+G TF I LP       P 
Sbjct: 967  KEFARLDEGAKTASGLGLGLSIVDRLSRMLHHPVQLISTPGKGTTFRIHLPREADRLAPA 1026

Query: 613  REEDGDTGQPTRDRSMRDLSVLVVDNEKQIQSGMRTLLTGWGCSVVTADGYDQAAALFAD 672
            + E G T     DR +  + VL +DNE +I  GM  LLTGWGC V+ A         F  
Sbjct: 1027 KTEGGTTSPAASDR-LHGIRVLCIDNEPKILEGMTLLLTGWGCDVLPAGSVAALEEPFLT 1085

Query: 673  -GRRPDIILVDYHLKDGETGDTVITRLHDHFGVRIPAVMISADRGEPLKTQLAAANIPLL 731
                PD+I+ DYHL DG+ G + I  +   +G  IPA++++ADR   +++      I + 
Sbjct: 1086 LAAAPDVIIADYHLDDGD-GISAIRLIRTFYGKTIPALLVTADRSPEVRSDAEKYGISVQ 1144

Query: 732  NKPVKPAQLRALL 744
            +KPVKPA LRA +
Sbjct: 1145 HKPVKPAALRAYI 1157



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%)

Query: 91  QVRLRDAIESINEGFVLFDAEDRLILYNEAY--LGFWPQVAERLDQNLTFHDIARIAAHS 148
           Q  L+ A+  +++G  +FD+  +L ++N  +  L   P+   ++   LT           
Sbjct: 644 QDMLQTALAQMDQGIAVFDSSQQLTIWNRRFRTLLDLPEQFGQVGVPLTEIVTMLQERGD 703

Query: 149 QGPAGAQVAPDRWVSDRLAKHGIADGGQVQRLADGRWIQINELRTSEGGIVGIYTDITEA 208
             P         +++  L    +  GG+       R I++      + GIV  +TDIT+ 
Sbjct: 704 MPPGDTDELITSFLTMDLPFSLVLAGGE-------RIIEVRSNTMPDKGIVATFTDITQR 756

Query: 209 KAED-ARARARELAERNV 225
            A D A  +A E  E+ V
Sbjct: 757 VASDQALKQANETLEQRV 774