Pairwise Alignments

Query, 437 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 493 a.a., Porin B from Xanthobacter sp. DMC5

 Score =  101 bits (251), Expect = 6e-26
 Identities = 104/415 (25%), Positives = 166/415 (40%), Gaps = 26/415 (6%)

Query: 26  QGPPAGPQTPPPPPPAMPQAGW-------RTRLKDSGVNLTFSYVSESAASISGGRDQGA 78
           + P A P      P   PQ GW       R +L ++G+ +  +Y+ E   +  GG   G 
Sbjct: 54  KAPAAAPAEEEAEPSIAPQLGWLGDWGGYRPKLAEAGIKVGVNYIGELWRNTEGGLGTGT 113

Query: 79  AYTQQLLASAVVDTGKAFGLAGGKIIATIIHRKGQDLTATRIGNLFEVQELFGGGQDLRP 138
           AY  +   S   D  K F   G    A+++  +G   +   +GN+  V  +       R 
Sbjct: 114 AYNGRFQFSLDADLDKLFNWKGATFHASVLQIQGSGFSGQYLGNIMGVSNV-DALSTTRL 172

Query: 139 AELSYEQQLNGGRTALKIGLYHTGDDFATLPSGCQFQNFAF-CPRPTTLFYNSGFSGFPI 197
            EL  EQ    G+++++ G      +FA   +G  F N  F  P        SG   +P+
Sbjct: 173 FELYIEQAFGDGKSSIRFGQLSADSEFAISDNGSLFLNSTFGWPALFAADLPSGGPAYPL 232

Query: 198 PRWGIRARQDIGHGLSISVAAFEVNSIRA----QTGNGWQLAPRFDS---VVLPVELGWK 250
              G+R +       ++ V  F  N        Q  N + L    D    V+  V   + 
Sbjct: 233 ATPGVRVKWVPNDEWTVLVGLFNGNPAPCCGDPQEENKYGLNFIVDQGVFVIGEVAYSYN 292

Query: 251 SGQGAGQLPGLVRVGGLIDTTDKPDVYADANG---DSYALSGLAPATRHERWSAWAMAEK 307
             + A  LPG V+VGG  ++        D  G    S A  GL P      ++ +A+ ++
Sbjct: 293 KAENAAWLPGTVKVGGWYNSNSFNSQVYDIFGVPLASPASIGL-PNQIQGDYAFYAIIDQ 351

Query: 308 MIVRF-GPGERGLSLFGTMTLSDRATARVPLFLSGGFVARGLWDNRPRDNFGLGLVYASV 366
           MI R  G  ++G+S+FG +T +     ++  +  GG   +GL   R  D FG+    A V
Sbjct: 352 MIWRKPGTKDKGISVFGRVTAAPSEQNQLGFYWDGGITFKGLVPGREDDAFGVAFGNARV 411

Query: 367 NPRIADRQRDQQSL---GQDVDPQRWEASGEIFYGWQATRALLLRPNLQYIHRVG 418
               A +Q D  +    G     +  E   E+ Y  Q      ++P+ QYI   G
Sbjct: 412 TN--AAQQADLYTALYNGSYYPIRSSETVLEVTYSAQVMPGWTIQPDFQYIWNPG 464