Pairwise Alignments

Query, 437 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 422 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 4e-44
 Identities = 130/402 (32%), Positives = 188/402 (46%), Gaps = 33/402 (8%)

Query: 46  GWRTRLKDSGVNLTFSYVSESAASISGGRDQGAAYTQQLLASAVVDTGKAFGLA-GGKII 104
           G R +L++ GV +T  Y  E+A +  GG  + A Y+Q +      D  K +GL  GGK+ 
Sbjct: 38  GLRHQLEEDGVKITGDYSGETAYNAHGGLHRSARYSQNVKLGVQFDLSKLYGLDNGGKVQ 97

Query: 105 ATIIHRKGQDLTATRIGNLFEVQELFGGGQDLRPAELSYEQQLNGGRTALKIGLYHTGDD 164
            TI  R+G   +   +GN   +QE +GG    R  ELSYE+ L      +K+G    G+D
Sbjct: 98  LTINDRRGNSASEDLVGNRLPIQENYGGLYT-RLTELSYERTLFTPALNVKLGYMAMGND 156

Query: 165 FATLPSG--CQFQNFAFCPRPTTLFYNSGFSGFPIPRWGIRARQDIGHGLSISVAAFEVN 222
              L SG  C F N  FC  P  +   SG++ +P    G+R + D+     + VAAF V+
Sbjct: 157 LGGLDSGILCNFMNAGFCGHPLNMSGGSGWTNYPNAHLGVRVKYDLSPAWQLRVAAFNVD 216

Query: 223 -SIRAQTGNGWQLAPRFDS-VVLPVELGWKSGQGAGQLPGLVRVGGLIDTTDKPDVYAD- 279
                 +   W L P+  +  V+PVEL +K     G+LPG  ++G   D++D   + +D 
Sbjct: 217 PESNGNSSRAWHLGPKHTTGTVVPVELVYKL---QGELPGEYKLGYYYDSSDVKRIGSDD 273

Query: 280 ---ANGDSYALSGLAPATRHERWSAWAMAEKMIVRFGPGERGLSLFGTMTLSDRATARVP 336
                G  Y L   A       W+  A          PG R L  FG  + S +A +   
Sbjct: 274 EVSGRGGHYLLVDQAV------WNDQA---------SPG-RSLHAFGQYSASSKAASPFT 317

Query: 337 LFLSGGFVARGLWDNRPRDNFGLGLVYASVNPRIADRQRDQQ-SLGQDV-DPQRWEASGE 394
            +   G V    ++ RP+D   LG   A  NPR  D   D   + GQ   D    E   E
Sbjct: 318 KWYGAGVVLYKPFEGRPKDTVALGYGRAVPNPRSRDVLEDAAFNAGQQFPDIDSAEQLIE 377

Query: 395 IFYGWQATRALLLRPNLQYIHRVGATS--RYPDAVVAGMTIK 434
           + YG+QAT  L LRP++QYI   GA S     +A+V G+ +K
Sbjct: 378 LSYGYQATPWLNLRPDVQYIIEPGAFSGKDIDNALVVGLQVK 419