Pairwise Alignments

Query, 165 a.a., Sigma-fimbriae tip adhesin from Sphingobium sp. HT1-2

Subject, 326 a.a., lipoprotein from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 12/140 (8%)

Query: 34  VTATVIKACVVSATALAFGNYDPTATGPTDATS-TLSVLCTVGTTYTVGLTAGTASGATV 92
           V+ TV   C ++A  ++FG+  P  +G T  T  T+S+ CT G+ Y+VGL+ G  + +  
Sbjct: 187 VSMTVTNDCQITAPNISFGSA-PVISGFTPVTGQTISISCTKGSAYSVGLSDGQNAVSVG 245

Query: 93  TTRKMSSGSNLLSYALYQDSAHTTNWGNTPATDTAAATAP--------VGTNALTVYGRI 144
             R+M SGSN L+Y L++ SA TT WG+  A    ++TA         +G+       RI
Sbjct: 246 GRRRMVSGSNYLAYDLFK-SAGTTRWGSVGAARRDSSTAEINPGNGLGIGSQVFNYNARI 304

Query: 145 TAGQ-NVPIGSYSDTITVNV 163
              Q   P G+Y D + ++V
Sbjct: 305 YTDQPTPPAGTYLDNVVLDV 324



 Score = 30.4 bits (67), Expect = 3e-05
 Identities = 42/155 (27%), Positives = 56/155 (36%), Gaps = 19/155 (12%)

Query: 16  LTGLAGTAQAATTTTTFPVTATVIKACVVSATALAFGNYDPTATGPTDATSTLSVLCTVG 75
           L GL  + QA    +T   TA V    V S           T  G    T++L  L T  
Sbjct: 11  LIGLLCSGQAMALCSTV-ATAPVSFGSVSSINVRTATQNSSTLNGGLSCTASLIALGTND 69

Query: 76  TTYTVGLTAGTASGATVTTRKMSSGSNLLSYALYQDSAHT--TNWG-------NTPATDT 126
             Y       T SG    T       +++ Y +Y ++  T   N G       N  AT  
Sbjct: 70  HFYAT--ITSTTSGMVGPT------GDVIGYTIYGNNTTTFPINRGIQFDFGPNGIATSA 121

Query: 127 AAATAPVGTNALTVYGRITAGQNVPIGSYSDTITV 161
              T P   N     G IT G NV  G Y++ ++V
Sbjct: 122 GLLTGPGSKNLPLYVGSIT-GTNVAAGVYTEVLSV 155