Pairwise Alignments

Query, 384 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 365 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  103 bits (256), Expect = 1e-26
 Identities = 96/343 (27%), Positives = 149/343 (43%), Gaps = 20/343 (5%)

Query: 44  EAQPADTLEITADGIKTSAISVEAVSGSSLSGIVMASATVEATPDAEAVLTARAPGTVTR 103
           E  PA+ L + A  IK + I ++  +  +L+  + A   V+A   +  +++ R    V  
Sbjct: 27  EPAPANPLALDAKAIKDAGIVLDKAAPRALTDELKAPGEVKADAYSTVLVSPRVESQVLA 86

Query: 104 IFKRIGDTVQAGEAIALVESRDASAIAADRGTAAARATLAARQLAREKSLLAQGVSARAD 163
              ++GD V+AG  + ++ S     +A  +G       +A +   R  SL  Q VSAR  
Sbjct: 87  RKAKLGDVVKAGAPLVVLSS---VQVAETQGA----LIVAEQDWQRIASLGPQAVSARR- 138

Query: 164 YETAEANLAVARAEAR-------QADAAARAARVAGDGRSVSVVSSVSGRITSATASLGS 216
           Y  A+     ARA+ R       Q     R      DG S  +++  +GR+T+    +G 
Sbjct: 139 YNEAKVQRDQARAKLRAYGLSDGQIGGLLRKGSAGADG-SFELLAPAAGRVTTDEFLVGE 197

Query: 217 FVQAETELFRVADPRSIQIEAAVPVADAGRVKAGDRVELTTSDGQKVEGRVRSATGVVDA 276
            V+    LF +    S+ + A +  ADA RVK      +   D   + G+V   +   D 
Sbjct: 198 RVEPGRTLFTLVKEDSVWVVAQMAPADAERVKPDADARILVHD-TTIPGKVVQRSHQTDE 256

Query: 277 QTRQATVVITPSGGGSAIAPGQLVQARIFASGGQGASGVTVPQDAVQTVGERTVVFVRTP 336
           +TR   V I        + PG+LV+ARI A  G     + VP +A+  +  +  VF+   
Sbjct: 257 RTRTVPVRIEVDNREDLLHPGELVEARIAA--GSAVPKLAVPAEAIVLLQNQPTVFLAKG 314

Query: 337 KG-FKAQTVQVASRSGGMVAIAVGLKAGQQIATTNAFLLKAEL 378
            G F+   V V     G   I  GLKAG       AF LKA L
Sbjct: 315 NGQFEPAPVMVGDTRDGWTVITQGLKAGDTYVRKGAFALKARL 357