Pairwise Alignments

Query, 1078 a.a., CzcABC family efflux RND transporter, transmembrane protein from Sphingobium sp. HT1-2

Subject, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

 Score = 1011 bits (2615), Expect = 0.0
 Identities = 539/1060 (50%), Positives = 723/1060 (68%), Gaps = 31/1060 (2%)

Query: 1    MIARILSLSVRMRWAVLFLTLAIVGFGGWQITKLPIDAVPDITNRQVQVNTFNPTLGPVD 60
            M  RI+  ++  R  V+   L + G G +   KLPIDAVPDITN QVQ+NT  P   P++
Sbjct: 1    MFERIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60

Query: 61   MEKQVTYPVETALAGIPGLTMTRSLTRNGFSQVTAIFTDSTDIFFARQQVTERLAQAKDS 120
             E+++T+PVETA+AG+PGL  TRSL+R+G SQVT IF D TDIFFARQ + ERL  AK+ 
Sbjct: 61   TEQRITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQ 120

Query: 121  LPSGVQPNLAPLSTGLGEIFFYSVAFRHPDGKNVKIVNGQPGWQSDGSYLTPEGERLTTE 180
            LP GV+  + P+STGLGEIF ++V     DG            + DG+  TP        
Sbjct: 121  LPEGVEAVMGPVSTGLGEIFLWTVEAE--DG----------AVKEDGTPYTPTD------ 162

Query: 181  LAKAAYLRTVQDWIIRPQMRNVKGVAGVDSNGGFVKQYLVQPNLNALATYGLSVTELADA 240
                  LR +QDWII+PQ+RNV GVA +++ GG+ KQ+LV P+   LATY L++ +L  A
Sbjct: 163  ------LRVIQDWIIKPQLRNVPGVAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAA 216

Query: 241  LQRANLSAGSNYIKRAGESFLVRADARLKSIEEIEEAVVATRAGVPVRVRDVGEVVIGGA 300
            L+  N + G+ YI+R GE  L+RA  ++ +IE+I   V+ +  G P+R+  V +V IG  
Sbjct: 217  LESNNANVGAGYIERNGEQLLIRAPGQVGNIEDIANIVITSVDGAPIRISSVADVSIGKE 276

Query: 301  VRTGSGSRMGSEAVISTVLMLVGDNSRIVAMSAAEKLTQINKGLPPDVFAEPVYNRSKLV 360
            +RTG+ +  G E V+ TV ML+G+NSR V+ + A KL  IN+ LP  V A  VY+R+ LV
Sbjct: 277  LRTGAATENGREVVLGTVFMLIGENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLV 336

Query: 361  NATISTVEKNLTEGALLVIVVLFLLLGNIRAALITAAVIPVTMLMTASGMNAIGESGNLM 420
               I+TV+KNL EGA+LVI +LFL LGNIRAALITA VIP++ML T +GM     S NLM
Sbjct: 337  EKAIATVKKNLVEGAILVIAILFLFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLM 396

Query: 421  SLGALDFGLIVDGAVIIVENALRRLAERQEHEGRLLTLSERLGETTEAAVEMVRPTVYGQ 480
            SLGALDFG+IVDGAV+IVENA+RRLA  Q   GR+LT +ER  E   AA E  RP ++GQ
Sbjct: 397  SLGALDFGIIVDGAVVIVENAIRRLAHAQHKHGRMLTKTERFHEVFAAAREARRPLIFGQ 456

Query: 481  LIIFLVFVPLLTFQGVEGKTFSPMAVTLMIALASAFILSITFIPAMIAIVIKGKVCETEV 540
            LII +V++P+    GVEGK F PMA T+++AL  A +LS+TF+PA IA+ + GKV E E 
Sbjct: 457  LIIMVVYLPIFALTGVEGKMFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVKEEEG 516

Query: 541  KPIRWFKEKYEPLLKKAVA-RPLPFIAAGGGMFLAAVLCFGLLGEEFMPQLDEKDITVTN 599
              +R  + +YEP+L+  +  R + F AA   + L+ +L    +G EF+P L E D  +  
Sbjct: 517  VVMRTARLRYEPVLQWVLGHRNIAFSAAVALVVLSGLLA-SRMGSEFIPSLSEGDFAMQA 575

Query: 600  FRVPSASIDQSTEMQLRIEN-TLKTLPEVALVFSKNGNADLGTDPMPPNASDTYVIPKPE 658
             RVP  S+ QS EMQ R+E   +  +PEV  +F+++G A++ +DPMPPNASD Y++ KP+
Sbjct: 576  MRVPGTSLTQSVEMQQRLEKAVIAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQ 635

Query: 659  SEWPSDVKSKDDILKRIEARMKPLIGNRTEIQQPIQMRFNELIAGVRADVAIKLYGDDLD 718
             +WP+  K +D+++  ++     + G+  E+ QPIQ+RFNELI+GVR+DVA+K++GDD+D
Sbjct: 636  DQWPNPKKPRDELIAEVQKAAAGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMD 695

Query: 719  QMSQQAQRIAAVVRKIPGAGDVSAEQTSGAPTFDVQIDRLAVARYGLSVEEVANTVAAAL 778
             ++  A +IAA ++ +PG+ +V  EQTSG P   + IDR   ARYGL++ +V N++A A+
Sbjct: 696  VLNNTANKIAAALKAVPGSSEVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAV 755

Query: 779  GGREAGLLFEGDRRFSVVVRLPDAQRDDLETLGSIPVMLPTPEGQVARS---IPLREVAR 835
            GGR+AG L+EGDRRF +VVRLP+  R D+  + S+ + +P    Q A     IPL +VA 
Sbjct: 756  GGRQAGTLYEGDRRFDMVVRLPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVAN 815

Query: 836  FSFTSGLNQISRENGKRMVIVQINVRGRDLGGFVTEAQQKVG-ELQLPAGMYTDWGGTFE 894
                 G NQISRENGKR+VIV  NVRGRDLG FV EA   +  ++Q+PAG +T WGG FE
Sbjct: 816  LDLQLGPNQISRENGKRLVIVSANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFE 875

Query: 895  SLQSARLRLLIVVPICFAAIFALLYMALGGAIPAAIVFSAVPMALAGGVFALLLRGIPFS 954
             LQSA  RL IVVP+    +  LL++         +VF+ +P AL GGV AL LR IP S
Sbjct: 876  QLQSAAKRLQIVVPVALLLVMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLS 935

Query: 955  ITAAVGFIALSGVAVLNGLVMMSAIRKYREDGAEEDQAIIGGAMERVRPVLMTALVASLG 1014
            I+A VGFIALSGVAVLNGLVM++ IR  RE+G    QA+  GA+ R+RPVLMTALVASLG
Sbjct: 936  ISAGVGFIALSGVAVLNGLVMIAFIRGLREEGRTLRQAVDEGALTRLRPVLMTALVASLG 995

Query: 1015 FVPMALATGTGAEVQRPLATVVIGGLITSTALTLLVLPAI 1054
            F+PMALATGTGAEVQRPLATVVIGG+++STALTLLVLPA+
Sbjct: 996  FIPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLPAL 1035



 Score = 43.9 bits (102), Expect = 6e-08
 Identities = 73/355 (20%), Positives = 154/355 (43%), Gaps = 34/355 (9%)

Query: 731  VRKIPGAGDVSAEQTSG--APTFDVQIDRLAVARYGLSVEEVANTVAAALGGREAGLLFE 788
            +R +PG  +++   T G  A  F V  D   +A Y L++ ++   + +      AG +  
Sbjct: 175  LRNVPGVAEIN---TIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIER 231

Query: 789  GDRRFSVVVRLPDAQRDDLETLGSIPVMLPTPEGQVARSIPLREVARFSFTSGLNQ-ISR 847
               +  +++R P  Q  ++E + +I  ++ + +G   R   +  VA  S    L    + 
Sbjct: 232  NGEQ--LLIRAP-GQVGNIEDIANI--VITSVDGAPIR---ISSVADVSIGKELRTGAAT 283

Query: 848  ENGKRMVIVQINVRGRDLGGFVTEA-QQKVGELQ--LPAGMYT----DWGGTFESLQSAR 900
            ENG+ +V+  + +   +    V++A   K+ ++   LP G+      D     E   +  
Sbjct: 284  ENGREVVLGTVFMLIGENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATV 343

Query: 901  LRLLIVVPICFAAIFALLYMALGGAIPAAIVFSAVPMALA---GGVFALLLRGIPFSITA 957
             + L+   I    + A+L++ LG    A I    +P+++     G+F   +     S+ A
Sbjct: 344  KKNLVEGAIL---VIAILFLFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLGA 400

Query: 958  A-VGFIALSGVAVLNGLVMMSAIRKYREDG----AEEDQAIIGGAMERVRPVLMTALVAS 1012
               G I    V ++   +   A  +++        E    +   A E  RP++   L+  
Sbjct: 401  LDFGIIVDGAVVIVENAIRRLAHAQHKHGRMLTKTERFHEVFAAAREARRPLIFGQLIIM 460

Query: 1013 LGFVPMALATGTGAEVQRPLATVVIGGLITSTALTLLVLPAITAFM--GRLKKKQ 1065
            + ++P+   TG   ++  P+A  V+  L+ +  L++  +PA  A    G++K+++
Sbjct: 461  VVYLPIFALTGVEGKMFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVKEEE 515