Pairwise Alignments

Query, 252 a.a., tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) from Sphingobium sp. HT1-2

Subject, 286 a.a., tRNA pseudouridine (38-40)synthase from Pseudomonas putida KT2440

 Score =  171 bits (433), Expect = 2e-47
 Identities = 101/249 (40%), Positives = 132/249 (53%), Gaps = 4/249 (1%)

Query: 2   ARFAFTVEFDGRPFMGWQRQAHG-PSVQQAIEDAINAVTGERAILHAAGRTDAGVHGLAM 60
           +R A  VE+ G  + GWQRQA G PSVQQA+E A++ V  E   +  AGRTDAGVHG   
Sbjct: 19  SRIALGVEYKGARYRGWQRQASGVPSVQQALEQALSKVANEPISVVCAGRTDAGVHGCGQ 78

Query: 61  RAHADVEKPLTPFRLMEAINAKLRPHPVAILACEEVAPDWHARFSCTGRAYIYRIANRRA 120
             H D              N  L PH ++++    +  D+HARF    R Y Y I N   
Sbjct: 79  VVHFDTRAVRDERAWTMGTNFNL-PHDISVVWSRPMPADFHARFKACARRYRYVIYNDPI 137

Query: 121 -PLTLESGLAWRVIQPLDADAMHDAAQILVGHHDFTTFRSIHCQAASPLKSLAMLDVERQ 179
            P  L   + W   +PLD D M +AAQ L+G HDF+ FR+  CQA SP+K +  L V R 
Sbjct: 138 RPAHLAEEVTWNH-RPLDVDRMAEAAQYLLGTHDFSAFRASQCQAKSPIKHIYHLRVTRH 196

Query: 180 GDRIAIRAEARSFLHHQVRSMVGCLAMVGMGRWSADDLRDALEARDRARLALNAPPDGLY 239
           G  I +   A +FLHH VR++ G L  +G G       R+ LE R+R    + A P GLY
Sbjct: 197 GQMIVLDVRATAFLHHMVRNIAGVLMAIGAGERPVAWAREVLEGRNRREGGVTAHPYGLY 256

Query: 240 FVRADYSSA 248
            V+ +Y  A
Sbjct: 257 LVQVEYPEA 265