Pairwise Alignments

Query, 258 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Sphingobium sp. HT1-2

Subject, 270 a.a., exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI from Pseudomonas putida KT2440

 Score =  146 bits (368), Expect = 5e-40
 Identities = 94/270 (34%), Positives = 143/270 (52%), Gaps = 16/270 (5%)

Query: 1   MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDETFPVKDIEDAGYGVIWHGQK 60
           M+I  FNING++AR  +L   +++ +PD+  LQE K SD+ FP+ D++  GY V +HGQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 61  GFNGVAILARGDQPVEVRRGLEGEPEDEQSRYL-----EADVKGVRVASIYLPNGNPQPG 115
           G  GVA+L+R   P+ + +G   + ED Q R++     +A+   + + + Y P G  +  
Sbjct: 61  GHYGVALLSR-QPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDH 119

Query: 116 P-KFDYKLRWMKRLRERAAEIWAEEVPAILAGDYNVIPRDVDIYSPKAMADDAL------ 168
           P KF  K R+   L+      +  + P ++ GD N+ P+D DI      A   L      
Sbjct: 120 PTKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCS 179

Query: 169 MQPESREAYRRLLGDGWTDSILTRHP-AGGVWTYWDYQAGAWPRD--AGFRIDHLLLSPA 225
             PE RE   RL G G  DS    +P     ++++DY++  +  +   G RID ++ S  
Sbjct: 180 FLPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQ 239

Query: 226 AADRLVDAQVDKAFRGREKASDHAPTWVEL 255
              R+  A VD   RG EK SDHAP W+EL
Sbjct: 240 LVPRIKAAGVDYELRGMEKPSDHAPIWLEL 269