Pairwise Alignments

Query, 426 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 354 a.a., Phage integrase, Phage P4-associated from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 74/308 (24%), Positives = 120/308 (38%), Gaps = 42/308 (13%)

Query: 10  LIGLKQENARYLDPKGNRLALVV-TKFSKTWTWQAR--VNGVPRTLTLGKFPAVGLADAR 66
           + G K  +  Y    G  L L+V T   K W ++    V       +LG +P V LA AR
Sbjct: 13  IAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMAR 72

Query: 67  AKAGQIQADHDAGIDVHVKYGAGLAAPDAMPVAEAKRAGMTCQ-----EAWDRYISGLKA 121
               + +     GID   ++ AG        +AE KR    C      E W         
Sbjct: 73  ETRTKYRRLLYQGIDPR-QHLAG--------IAEEKRIQNECTLEKVAEQW--------- 114

Query: 122 GTNLHGKARNKPRTIIEKEGMWTRLWAE---EIGGTLMDEVTEEALYDVIQGLRDDGYMG 178
              L  K R    +    + +W  L       +G T + E+  + L + +  L + G + 
Sbjct: 115 ---LKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILE 171

Query: 179 AANSTTRYIKAFFRWGKLEKRATGLRTNPAEDLPVSQLQARDRY---LTENEIRYLLTAL 235
                   +   FR+   E+    +  NPA++L     + + +    L  +E+  L+ AL
Sbjct: 172 TLRRVISRLNEIFRFAISEEL---IEFNPADNLVARFKKPKKQNMPALHPSELGRLMLAL 228

Query: 236 QAEDQIWMDAYRLA---LMTGQRKNEIFGALRSEVDIGARHITISADRMKHNRAHVVPLT 292
           Q    I  +   L    L+T  R  E   A   ++D+      I    MK NR+H VPL+
Sbjct: 229 Q-NASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLS 287

Query: 293 QQAWEIVE 300
           +QA  +++
Sbjct: 288 KQALRVLQ 295