Pairwise Alignments

Query, 300 a.a., Site-specific tyrosine recombinase XerC from Sphingobium sp. HT1-2

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score =  124 bits (311), Expect = 3e-33
 Identities = 103/301 (34%), Positives = 148/301 (49%), Gaps = 21/301 (6%)

Query: 9   LPERWRQHLSLDRRRSAHTVRAYVATAERLVAFLAEHQGQAVTAASLARLEQADLRAYLA 68
           L +R+   L L++  S +T +AY +       +L E   + V A     L+      +LA
Sbjct: 8   LIDRFLDALWLEKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGRELILD------HLA 61

Query: 69  SRRVDGIGNISAARELSAVRGFLKFVGG----AEARVPQLKGPRVKRGLPRPISPD--EA 122
            R        S AR LS VRGF +++      A     Q+  P++ R LP+ +S    EA
Sbjct: 62  WRLEQNYKPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEA 121

Query: 123 LALAGDVAEGAREDWIGARDWAVLLLLYGAGLRIGEAMGLMGDIMPLGD-TLRVTGKRGK 181
           L  A D++E      IG RD A+L +LY  GLR+ E + L  + + L    LRV GK  K
Sbjct: 122 LLAAPDLSEA-----IGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSK 176

Query: 182 TRLVPLLPQVRSAIEAYADQCPWSPERDQP---LFRGARGGPLSAALIRRSVQGARGRLG 238
            RLVP+  +    +E Y           +P   LF   RG  ++       ++      G
Sbjct: 177 ERLVPMGEEAIVWVERYMRDARSELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAG 236

Query: 239 LSDRTTPHALRHSFATHLLGRGADLRSLQELLGHASLTSTQVYTQVDAAHLLDVYRAAHP 298
           +    +PH LRH+FATHLL  GADLR +Q LLGH+ L++TQ+YT V  A L D++   HP
Sbjct: 237 IGKALSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHP 296

Query: 299 R 299
           R
Sbjct: 297 R 297