Pairwise Alignments

Query, 354 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  106 bits (265), Expect = 1e-27
 Identities = 96/347 (27%), Positives = 150/347 (43%), Gaps = 29/347 (8%)

Query: 16  GCGGEKEKKARPPALVEAVAIAPTRFTDNVEAVGTALANEQVILSAPVTERIDVLNFTDG 75
           G GG  +     P  V  V +    F    +A+GT  A   V + + V   +  ++F +G
Sbjct: 57  GFGGSSD-----PVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEG 111

Query: 76  GFVSKGQVIARMAVGQEKAELAAAEATALQADQQLKRIQ----------ALKSRGFATGA 125
             V  G ++A +     +  L  AE T  Q   QLK  Q          A  S    T  
Sbjct: 112 QRVKAGDLLAEIDPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLD 171

Query: 126 TVEQQIA----LANSARANADLARAGIGDRTIRAPFSGWVSLRTVSPGAVITAG--TAIA 179
           T E Q+A    L  + +A  + AR  +    IRAP SG V LR +  G ++ A   TA+ 
Sbjct: 172 TAEAQVAQFQGLVKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALV 231

Query: 180 TVSDISRIKLDFTVPETRLSMIRE------GMPIKALSAAWPDRPFNGTIATIDPVIDPA 233
            ++    I + FT+PET LS + E       +P++A           G + +ID  ID  
Sbjct: 232 VITQTEPINVAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTT 291

Query: 234 TRAVRVRAIMPNPDKALKPGMLLTVSVFSRE-RQSLGVPELAVIGDGDERFVFVLDGR-T 291
           T  ++ +    N D AL P   + V + +   +Q +  P  A+    D  F +V++ + T
Sbjct: 292 TGTLKFKGRFENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQST 351

Query: 292 AKRTKVETGIRQNGLVEILGGVKAGQQIVTEGVVKLTDGAPVRLAGD 338
               K++ G        IL G+KAG ++V EG  +L +G  V +  D
Sbjct: 352 VNVRKLKVGASDGENSVILDGLKAGDRLVLEGTDRLREGTKVEVVED 398