Pairwise Alignments

Query, 1034 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

Subject, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score =  565 bits (1455), Expect = e-165
 Identities = 350/1026 (34%), Positives = 555/1026 (54%), Gaps = 31/1026 (3%)

Query: 8    VRRPVFSAVVAVLMCIVGLVGYFSLSVREYPDTDPPIVSVETTYTGAAASVVETRITQQI 67
            + RP+F+ VVA+ + + GL+    L V +YP+  PP V +   Y GA+A  ++  +   I
Sbjct: 6    IDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDESVVSLI 65

Query: 68   EDAVAGVQGIQTITSTSQDGTSNINIEFDPSRDIDSAANDVRDRVGSVTQDLPEDALAP- 126
            E  + G   +    S S  G++ I   F P  + + A  DV++R+ +V   LP+      
Sbjct: 66   EQELNGADHLLYFESQSSLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQAVTQQG 125

Query: 127  -EIRKVDSDARSILFLAFSRPGWSPIQISDYLDRNIADRFAAIDGVARVTIGGEARPSTR 185
             ++ KV +    ++ L  +      + +SDYL RN+ +    +DGV +  + G  R + R
Sbjct: 126  LQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGAER-AMR 184

Query: 186  IWFNAEKLAAFGLTPADVEAALRTQNVELPAGRF------ESKDQNQTLRVERPFATPDQ 239
            +W + +KL  F LTPADV AA+  QN ++ AG         +++    + V+   +TP +
Sbjct: 185  VWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQLSTPAE 244

Query: 240  FAQLVVGRGEDGYQVKLGDVARIEEGAENPYSSFRSNQGTAIGIGIIRQSGANTLEVAQK 299
            FA +V+    DG  V++GDVAR+E G++    S R N   +  + +    GAN L  A  
Sbjct: 245  FADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANALNTATL 304

Query: 300  AKALIKELEPTLPKGMKVAIGTDESLFIERAIDNVYDTLIEAALLVILVIFLFLGSVRAT 359
             +A + EL    P  ++  I  D S F++ +I  V  TL+EA  LV  V+FLFL +VR T
Sbjct: 305  VRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQNVRYT 364

Query: 360  IVPAVTVPICLLATCAVMWLLGLSINLLTLLAFVLAIGLVVDDAIVVLENVYH-RVEQGD 418
            ++P + VPI L+ T A M LLG SIN+LT+   VLAIG++VDDAIVV+ENV      +G 
Sbjct: 365  LIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMATEGL 424

Query: 419  DPLVAAYLGTRQVGFAIISTTLVVCAVFVPVMFLAGQTGLLFRELAIAMIAAIGFSGFIS 478
             P  A      Q+  AII  TLV+ AVF+P+ F+AG  G+++++ +++M  +I FS F++
Sbjct: 425  SPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILFSAFLA 484

Query: 479  LSLAPMLCSKLLKNAERGR------LARWVDDRFQRIEHGYGRWLDWTLKKPLMPLLGVA 532
            L+L P LC+ LLK   +G          W + RF+++   Y  W+ + LK+    LL   
Sbjct: 485  LTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGRYLLIYL 544

Query: 533  IFLGVAFFLFTRLPAELAPAEDTGVVEANVNAPEGTGFDRMMAYMQKIENDLAFLRKDGT 592
            + L    ++F+RLP+   P ED G    ++  P G   +R +   ++IE   A   + G 
Sbjct: 545  VLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNA--EEPGV 602

Query: 593  LQNLVIRTPGGFGTTDDYNNGNVIAF--LRPWEDRTI--TTAEVATIINKVIADQPGVRG 648
                +I    GF  +    N   +AF  L+ W +R+   + + +A   N   ++      
Sbjct: 603  GDTTMIM---GFSFSGSGQNA-ALAFTTLKDWSERSSDDSASSIADRANMAFSELKDAIA 658

Query: 649  NAA---PRSGLGRGRGLPVNIVLAGST-YEGLVAARDRIMLAAASYPGLINLDSDYKETK 704
             A    P  GLG   G    +   G   +  L+AAR  ++ AA   P L N+        
Sbjct: 659  YAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALAEA 718

Query: 705  PQMRIETDLQRAGDLGVSVNDVSQALQSLLGSRRVTTYVDRGEEYRVLVQAERDGRQTLA 764
            PQ+++E D ++A  LGVS  DV   L S +GS  +  + ++G   RV+VQAE D R  +A
Sbjct: 719  PQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVA 778

Query: 765  DLERIQVRSRRGVLVPLSAVVTVREVAGPRQLNRYNKLRAITLTAALAPGTSLGQGLAFL 824
            DL +I VR+  G +VPLSA V  +   GP QL RYN   AI ++   APG S G+ +  +
Sbjct: 779  DLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMDEI 838

Query: 825  EDQARQSPEVLAIGYRGESQSLRETGGSIWIVFGLTILIVYLLLAAQFESFIHPGVIIAT 884
            +    Q P  L   + G S   R +G    ++ GL++LIV+L LAA +ES+  P  ++  
Sbjct: 839  QRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLV 898

Query: 885  VPLAVAGGALGLAITGGSINLYSQIGIVMLVGLAAKNGILIVEFANQLRDEGMEIAEAIR 944
            VPL V G  + + + G   +++ ++G++ ++GL+AKN ILI+EFA  L D+G ++  A  
Sbjct: 899  VPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTATL 958

Query: 945  EAAKRRLRPILMTSIATVIGAVPLVLRGGAGAAARHSIGVVIVFGVSLATLITLFLIPIF 1004
            +AA+ RLRPI+MTS+A ++G VPL +  GA +A++ +IG  ++ G+  ATL  +F +P+F
Sbjct: 959  KAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVVF-VPVF 1017

Query: 1005 YSRVAK 1010
            +  V K
Sbjct: 1018 FVVVMK 1023