Pairwise Alignments

Query, 377 a.a., Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage from Sphingobium sp. HT1-2

Subject, 450 a.a., Regulator of sigma-E protease RseP from Pseudomonas sp. DMC3

 Score =  133 bits (335), Expect = 8e-36
 Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 6/227 (2%)

Query: 141 PAVAGMVQPGSAAAMAGIQPGDRIVSLNGRAMSTFDDIRLYAQIRPGEPVTILLDRKGQV 200
           P V   + P   A  AG++ GDR+++L+G+ +  +  +    + RP   + + ++R    
Sbjct: 223 PPVLAELDPKGPAQAAGLKTGDRLLALDGQPLDDWQQVVDTVRTRPDTKIMLRIERDNAQ 282

Query: 201 IEKQGHVGAVSEDDGFGNKFRIGRLGIAPGEPVIEPVSLLRAPVVAI----ERTGQIIRT 256
           I+    + A  E          G   I     +I  VS    P+ AI     RT  +   
Sbjct: 283 IDVPVTLAARGESKAPSGYLGAGVKAIDWPPEMIREVSY--GPLAAIGEGARRTWTMSIL 340

Query: 257 MVETLGQVIGGDRSVKELGGPLKIAQVSGQAATLGLESFIFFIALISINLGFINLLPIPM 316
            +++L +++ G+ SVK L GP+ IA+V+G +A  G+  F+ F+A +SI+LG +NLLPIP+
Sbjct: 341 TLDSLKKMLFGELSVKNLSGPITIAKVAGASAQSGVADFLNFLAYLSISLGVLNLLPIPV 400

Query: 317 LDGGHLLFYGVEAVQRRPVSPQVQDWAYRSGLALLMTVMLLVTFNDL 363
           LDGGHLLFY +E V+ RP+S +VQ W  + G++L++ VMLL   NDL
Sbjct: 401 LDGGHLLFYLIEWVRGRPLSDRVQGWGIQIGISLVVGVMLLALVNDL 447



 Score =  129 bits (323), Expect = 2e-34
 Identities = 85/232 (36%), Positives = 115/232 (49%), Gaps = 12/232 (5%)

Query: 8   LLTILAFVAVIGPLVFVHELGHYLVGRWCGVKAEAFSIGFGPEIAAWVDRRGTRWRLAAL 67
           L  I   +  +G LV  HE GH+ V R CGVK   FS+GFG  +  W D++GT + +AA+
Sbjct: 4   LYMIAGTLIALGVLVTFHEFGHFWVARRCGVKVLRFSVGFGMPLLRWHDKQGTEFVVAAI 63

Query: 68  PLGGYVRFKGDMNAASQTDPKWLEMSAQDRAESFPAKPLWQRAAIVAAGPAINFLFAILI 127
           PLGGYV+           D +  E+      +SF  K + QR AIVAAGP  NFL A++ 
Sbjct: 64  PLGGYVK---------MLDEREGEVPVDQLDQSFNRKSVRQRIAIVAAGPIANFLLALVF 114

Query: 128 LAAFAFLHGESRTPAVAGMVQPGSAAAMAGIQPGDRIVSLNGRAMSTFDDIRLYAQIRPG 187
               A L  E   P V G V+ GS AA AG+  G  IVS++G   S +  + L    R G
Sbjct: 115 FWVLAMLGSEQVRP-VIGAVESGSIAAKAGLNAGQEIVSIDGEPTSGWAAVNLQLVRRLG 173

Query: 188 E--PVTILLDRKGQVIEKQGHVGAVSEDDGFGNKFRIGRLGIAPGEPVIEPV 237
           E   + +L+  +G   E    +   +   G      I  LGI P  P + PV
Sbjct: 174 ESGAIQLLVREQGSTAESPRTLALDNWLKGADEPDPIRSLGIRPWRPALPPV 225