Pairwise Alignments

Query, 502 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Sphingobium sp. HT1-2

Subject, 537 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 85/347 (24%), Positives = 137/347 (39%), Gaps = 64/347 (18%)

Query: 6   PRLRRLSRRAALI------AGASLGLALGSCSDEGSGPVVVSVIGNRTELAKPLQNLPNP 59
           P L   SRRA L+      AG  L L++ + ++   G  +V  IG+ T+  + L      
Sbjct: 6   PELPVFSRRATLLSASFAAAGTLLPLSVFAAAEPKRGGTLV--IGS-TQTPRHLNGAVQS 62

Query: 60  AAKLILEATA--QGLVAFDAGGDILPALAQRWVVEDDGRSYIFRLRR-AFWANGARVTAP 116
                + +T      + FD   +  P LA+ W + DDG+S   +LR+ A + +G  VT+ 
Sbjct: 63  GIATAMPSTQIFASPLRFDDKWNPQPYLAESWKLADDGKSLTLKLRKDALFHDGKPVTSA 122

Query: 117 DVARMLMARIEMLRQLDPDGPLDAVQAVVPMTGEVIEIRMAAARPYVLQMLAQPQMAVLS 176
           DVA  ++A           GP++ V      T  V   RM+   P ++  ++     +L 
Sbjct: 123 DVAFSILAIKANHPFTTMMGPVEKVDTPDAYTAVV---RMSVPHPAIVLAMSPALCPILP 179

Query: 177 R----DG--------------GTGPYRSVWRSGAAMLAPVDRLSGDDADSDEEEAGVPAW 218
           +    DG              G+GPYR           P  R+  +  D    +  +P  
Sbjct: 180 KHIYGDGQDLKNHPRNTTDVIGSGPYR------VTDFKPAQRVVLERFD----KFFIPG- 228

Query: 219 QTRVLRAERASLAIIRFREKQSALVLGGRYADLPLLVPAGIDRDAVRM--DPVQGLLGLA 276
                        II      ++L+LG    D+ ++  A +  D  R+  DP   L    
Sbjct: 229 ------RPYLDKIIINITPDSASLMLGLERGDIQMVPFATLPTDLKRLANDPKMSLTPKG 282

Query: 277 VTGKGDL-----------LDDDGVRAAINMAVDRNQLLQMFPLGGWA 312
             G G L           L D  VR AI  A+D+N + +   +GG+A
Sbjct: 283 YDGIGALNWLAFNTAKKPLSDVQVRKAIATAIDKNFITKAL-MGGFA 328