Pairwise Alignments

Query, 502 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Sphingobium sp. HT1-2

Subject, 531 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 58/210 (27%), Positives = 84/210 (40%), Gaps = 28/210 (13%)

Query: 10  RLSRR---AALIAGASLGLALGSCSDEGSGPVV--VSVIGNRTELAKPLQNLPNPAAKLI 64
           +LSRR   AAL  GA LG A+   S   + PV    + I   +E A  ++   N     +
Sbjct: 3   KLSRRTFNAALGIGA-LGTAIPGISFAQTTPVRGGTARIVAASEPAMLIELFQNTGNAGV 61

Query: 65  LEATAQGLVAFDAGGDILPALAQRWVVEDDGRSYIFRLRRAF-WANGARVTAPDVARMLM 123
                +GL+         P LA+ W +  DG++Y F LR    W +G   T+ DVA  L+
Sbjct: 62  GSRVIEGLLKVSFDRTFKPHLAESWDISADGKTYTFHLRPGIKWHDGQPFTSADVAFSLL 121

Query: 124 ARIE----------MLRQLDPDGPLDAVQAVVPMTGEVIEIRMAAARPYVLQML------ 167
              E           L ++D   PL  V         ++      A P + + L      
Sbjct: 122 TLKETHPRRRVTFASLEKIDTPDPLTVVAQFKTPVPFLLPALSGIASPIIPKHLYEETDI 181

Query: 168 -AQPQMAVLSRDGGTGPY-RSVWRSGAAML 195
            A P  A   +  GTGPY    W  G+ +L
Sbjct: 182 RANPYNA---KPIGTGPYVFKEWERGSHIL 208