Pairwise Alignments

Query, 341 a.a., tRNA pseudouridine(55) synthase (EC 5.4.99.25) from Sphingobium sp. HT1-2

Subject, 318 a.a., tRNA pseudouridine(55) synthase TruB from Dickeya dianthicola ME23

 Score =  135 bits (340), Expect = 1e-36
 Identities = 97/312 (31%), Positives = 140/312 (44%), Gaps = 63/312 (20%)

Query: 1   MHGWIILDKPHGLGSTQAVSAVKRALRTQREVLGGTEKWKVGHGGTLDPLATGVLPIAIG 60
           +HG ++LDKP G  S   +  VKR               K GH G LDPLATG+LP+ +G
Sbjct: 11  IHGVLLLDKPQGASSNDVLQKVKRLFNAN----------KAGHTGALDPLATGMLPVCLG 60

Query: 61  EATKLAGRMLDSDKIYDFTIAFGAQTDTLDLEGKVIAESEVRPTLAQLEAILPRFTGPIE 120
           EATK +  +LD+DK Y      G +TDT D +G VI E  +  T   L   L  F G  +
Sbjct: 61  EATKFSQYLLDADKRYRVIARLGLRTDTSDADGNVIQERLITFTRDLLMQALDGFRGDTK 120

Query: 121 QAPPAYSAILIDGQRAYDLARKGEQVEMKTRSVTIHELFLPGTGRGTASRSDGVEGQAPL 180
           Q P  YSA+   G+  Y+ AR+G  V  + R +T++EL                      
Sbjct: 121 QVPSMYSALKYQGRPLYEYARQGLVVPREARDITVYELQF-------------------- 160

Query: 181 DMTLEGQDRVGVPLHHASHGSPPRAGEELASVTLRAHVSKGTYIRSLARDIALALGTVGH 240
            +  EG +                       + L  H SKGTYIR++  D+   LG   H
Sbjct: 161 -IRWEGDE-----------------------LELEIHCSKGTYIRTIIDDLGEKLGCGAH 196

Query: 241 VTMLRRIKAGPFTLETAISLDKL-----DEAARGGDIGE----LMLPLTAGLDDIPALAV 291
           V  LRR++   +  E  ++L++L        A+   IGE    L+LP+   +     + +
Sbjct: 197 VIYLRRLQVATYPTERMVTLEQLQALREQAEAQEQPIGELLDVLLLPMDTAVQAFAEVNL 256

Query: 292 SPDEALALRQGK 303
           SP  A  L+ G+
Sbjct: 257 SPVVAGYLKLGQ 268