Pairwise Alignments

Query, 556 a.a., DNA repair protein RecN from Sphingobium sp. HT1-2

Subject, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

 Score =  327 bits (839), Expect = 6e-94
 Identities = 205/557 (36%), Positives = 293/557 (52%), Gaps = 11/557 (1%)

Query: 1   MLTSLAIRNVVLIEALDLEFGAGLSVLTGETGAGKSILLDSLGLALGARADSGLVRAGEA 60
           ML  L+I N  ++E LDLE   G+SV+TGETGAGKSI+LD+LGLALG RADSG+VR G  
Sbjct: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60

Query: 61  QASVTASFD--PPPAGHRAALLLADNGIEIEAGEPLLIRRTVKADGGSRAFINDQACSAA 118
           +A + A+FD    P  H     LA+  ++ E     ++RR + A+G SR +IN   C   
Sbjct: 61  KADILATFDLVDIPEAHT---WLAERDLDNEG--LCILRRVITAEGRSRGYINGTPCPLG 115

Query: 119 LLRDLGGALVEIHGQHDDRGLLNARGHRALLDTYGRCE--AEAVATAYTAWRAAAADLAQ 176
            L+ LG  L++IH QH+ + LL    HR LLD Y      A  V  A   W     +L +
Sbjct: 116 DLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELER 175

Query: 177 ARDTVTNAARDRDYLDHAVAELSKFAPEAGEEATLAEERATMQKGARLSDDLSAVTDCLT 236
             ++          L + + EL        E   L +E   +     L      V D  +
Sbjct: 176 LSNSGDEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCS 235

Query: 237 GSDGG--LAQLRQAARRLDRIAGEYEPLSAVLEALDRAVIEAGEAEDKLAEAAEALSFDP 294
            SD G  L+ L  +  RL       + LS     +  A I+  EA  +L    +    DP
Sbjct: 236 ESDSGNVLSALTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADP 295

Query: 295 ARLDTIETRLFDLRGLARKHQVAPDDLAALRDEMAARLAAIEGGEEHIAALEADVARKAA 354
            RL  +E RL  +  LARKH+V P +L  L+ ++   L  +   +E I  L  ++A  A 
Sbjct: 296 IRLQALEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQ 355

Query: 355 TYRAAAQALSAERQLAAGRLDAAVAGELAPLKLDAARFRTVVAPLDEGQWSGAGMDRVEF 414
            Y+  A+ LS  RQ AA +L  AV  E+  L +   RF   +   +  + S  G++++E 
Sbjct: 356 HYKEKARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIEL 415

Query: 415 EISTNPGAPFAPLAKIASGGELSRFILALKVALAERGGADTLIFDEIDRGVGGAVADAIG 474
            +S NPG P   LAK+ASGGELSR  LA++V  A+     TL+FDE+D G+GG  A+ +G
Sbjct: 416 LVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVG 475

Query: 475 ERLSRLAQSNQILVVTHSPQVAARGAGHMLIAKSSDGTVTRTGVHALSDGERREEIARML 534
           + L RL +  Q+L VTH PQVAA+G  H+ + K  +   T T V +L   ER EE+ARML
Sbjct: 476 QLLRRLGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARML 535

Query: 535 SGAEITAEARAQAERLL 551
            G ++T E+ A A +++
Sbjct: 536 GGIDLTKESLAHARKMV 552