Pairwise Alignments

Query, 454 a.a., Two-component system response regulator protein from Sphingobium sp. HT1-2

Subject, 444 a.a., response regulator regulating glmY sRNA in two-component system with sensor protein GlrK from Escherichia coli BL21

 Score =  306 bits (785), Expect = 7e-88
 Identities = 183/456 (40%), Positives = 261/456 (57%), Gaps = 23/456 (5%)

Query: 1   MSDTRPKLLIVEDDPGLQRQL--RWAYEDYQLFIAGDRLEAIEMLRMEAPDVVTLDLGLP 58
           MS     LL+V+DDPGL + L  R   E Y +  A    E + +L  E  D+V  DL + 
Sbjct: 1   MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMD 60

Query: 59  PDPDGTSEGFATLEEILRIKPDTKVIVASGHGARESALNAISGGAYDFYQKPVDIDELGL 118
                  +G     EI +++P   VI+ + HG+   A+ A   G + F  KPVD D L  
Sbjct: 61  E-----MDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQ 115

Query: 119 IVRRAFHVHALEQENARLAEAAPEGGRVLGRMITGASEMMRVARTIERVASADVSVMLLG 178
            +       ALEQ     A A  E  R    ++T +  M+R+      VA +DVSV++ G
Sbjct: 116 AID-----DALEQS----APATDERWREA--IVTRSPLMLRLLEQARLVAQSDVSVLING 164

Query: 179 ASGTGKELLAQGLHDASPRRGGAFVAINCAAIPETLLESELFGHEKGAFTGAVKTTPGKI 238
            SGTGKE+ AQ +H+ASPR    F+AINC A+PE LLESELFGH +GAFTGAV    G  
Sbjct: 165 QSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLF 224

Query: 239 EQAQGGTLFLDEVGDIPLPLQVKLLRFLQERVIERIGGRQPIAVDTRIVCATHQDLDAMI 298
           + A+GGTLFLDE+GD+P PLQVKLLR LQER +  +G  + I ++ RI+ ATH+DL   +
Sbjct: 225 QAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAM 284

Query: 299 AAASFREDLYYRLAEIVIRIPALRDRPGDPALLARHFLTRFAQDMNPQVKGFAPDALAAL 358
           A   FREDLYYRL  + ++IPAL +R  D  LLA H L + A+   P V+ F+ DA+  L
Sbjct: 285 ARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRL 344

Query: 359 DAWGWPGNVRELENRVKRAVIMADGKHVTAADLD--LDGDRAEGSEVVNLKAAREMADRR 416
               WPGNVR+L N +++ V +     ++ A ++  L+G   E + +     AR   +  
Sbjct: 345 MTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEG---ENTALPTFVEARNQFELN 401

Query: 417 AIRRAIARTDGNISSAAKILGISRPTLYDLLKQYKM 452
            +R+ +  T GN++ AA++ G +R   Y LL ++++
Sbjct: 402 YLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHEL 437