Pairwise Alignments

Query, 773 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Sphingobium sp. HT1-2

Subject, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

 Score =  303 bits (776), Expect = 3e-86
 Identities = 190/465 (40%), Positives = 273/465 (58%), Gaps = 29/465 (6%)

Query: 8   LETTLHNALTHASERKHEYATLEHLLLALIDDEHASKVMQACGVELGELADAVTQYLDTE 67
           L+  + +A + A    H      HLL AL++ +  S  ++   +++G   + + Q L  E
Sbjct: 10  LQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGS--IKPLLMQVGFDINGLRQGLVKE 67

Query: 68  LDSL-KVEGAS-DPSPTSGFQRVVQRAILHVQSSGKDEVTGANVLVALFSERESYAVYFL 125
           LD L K++  + D + +    R++ +A    Q  G   ++   VL+A   E        L
Sbjct: 68  LDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLLL 127

Query: 126 QQQDMSRLDAVSYISHGVGKGTPTPERQETKGAAEEEKKVQDGKGKKD-SALEQFTVNLN 184
            Q              GV K          +G A     V D   ++   AL+++TV+L 
Sbjct: 128 SQ--------------GVSKKALENAINNLRGGAA----VNDANAEESRQALDKYTVDLT 169

Query: 185 EKAERGKVDPLIGRSSEVDRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLARKIVEGEVP 244
           ++AE GK+DP+IGR  E+ RT+Q+L RR+KNNP+ +G+PGVGKTAIAEGLA++I+ GEVP
Sbjct: 170 KRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVP 229

Query: 245 DVLKEAVIYSLDMGALLAGTRYRGDFEERLKAVVTELEKMP-HAVLFIDEIHTVIGAGAT 303
           D LK   + +LDMGAL+AG +YRG+FEERLK+++ EL K     +LFIDE+HT++GAG  
Sbjct: 230 DGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAG-K 288

Query: 304 SGGAMDASNLLKPALSGGTIRCIGSTTYKEFRNHFEKDRALLRRFQKIDVNEPSVEDTIK 363
             GAMDA N+LKPAL+ G + C+G+TT  E+R   EKD AL RRFQK+ V EPS EDTI 
Sbjct: 289 GEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIA 348

Query: 364 ILTGLRTAFEEHHHVKYTPDAIKAAVELSARYINDRKLPDKAIDVIDEVGAMQMLVVPSK 423
           IL GL+  +E HH V  T  AI AA +LS RYI DR+LPDKAID+IDE  +   + + SK
Sbjct: 349 ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSK 408

Query: 424 RK--KTITPKEIEAVIATMARIPPKTVSSDDKSVLESLTTDLKRV 466
            +    +  + I+  + + A    K      K  LE LT +++R+
Sbjct: 409 PEVLDRLDRRLIQLKVESQAL--KKEEDEAAKKRLEKLTEEIERL 451



 Score =  281 bits (718), Expect = 1e-79
 Identities = 149/350 (42%), Positives = 234/350 (66%), Gaps = 9/350 (2%)

Query: 403 DKAIDVIDEVGAMQMLVVPSKRKKTITPKEIEAVIATMARIPPKTVSSDDKSVLESLTTD 462
           ++++ ++D+ G     ++ +K    +T +EI  V++    IP   +   ++  L  +   
Sbjct: 510 ERSLQMVDQHGKTDNQLLRNK----VTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEEL 565

Query: 463 LKRVVFGQDQAIEVLSSAIKLSRAGLRDPDKPIGNYLFSGPTGVGKTEVARQLATLL--- 519
           L + V GQ +A+  +++A++ SRAGL DP++P G++LF GPTGVGKTE+ + LA  L   
Sbjct: 566 LHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDT 625

Query: 520 GIPLQRFDMSEYMERHSVSRLIGAPPGYVGYDQGGLLTDAVDQQPHSVLLLDEIEKAHPD 579
              + R DMSE+ME+HSV+RLIGAPPGYVGY++GG LT+AV ++P+SV+LLDE+EKAHPD
Sbjct: 626 EEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPD 685

Query: 580 LFNILLQVMDNGRLTDHHGKTVDFRNTILIMTTNAGASDMAKESIGFGELTREDVQEDAV 639
           +FN+LLQV+++GRLTD HG+TVDFRNT+++MT+N G++ + +E +G  E  R  V  DAV
Sbjct: 686 VFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQI-QELVGDREAQRAAVM-DAV 743

Query: 640 KKLFTPEFRNRLDAIVPFGYLPPEIVARVIDKFVLQLELQLADRDVHITLDEDAKAWLTK 699
              F PEF NR+D +V F  L  E +A + +  + +L  +L +R++ ++L  +A   L  
Sbjct: 744 GAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIA 803

Query: 700 KGYDKLYGARPMGRLMQEKIKQPLAEELLFGKLVHGGEVHVHMKDEALAF 749
            GYD +YGARP+ R +Q  I+ PLA+ +L GK + G  +   ++ + + F
Sbjct: 804 VGYDPVYGARPLKRAIQRWIENPLAQLILAGKFLPGTAITAKVEGDEIVF 853