Pairwise Alignments

Query, 552 a.a., SWI/SNF family helicase from Sphingobium sp. HT1-2

Subject, 1105 a.a., helicase SNF2/RAD54 family from Pseudomonas putida KT2440

 Score = 77.8 bits (190), Expect = 2e-18
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 39/443 (8%)

Query: 124  GMLLGDDVGLGKTVSAIAALLFGAPM-----PAAIVVQPHLAGQWKKRIEEFS-SLRAHI 177
            G +LGDD+GLGKT+ A+A LL          PA  V+   L   W    + F+  LR   
Sbjct: 655  GGILGDDMGLGKTLQALAHLLLEKQSGRLSAPALAVMPTSLIPNWLDEAQRFAPDLRVLA 714

Query: 178  IKG--RTPY--DLPEADVYIFKYSNVAGWVDIIKEGLFRSVVYDEVQELRHGHGTSKGAA 233
            + G  R+ +   L E D+ +  Y+ +   ++ ++   +  ++ DE Q ++    +S  AA
Sbjct: 715  LHGPGRSKHFTKLHEYDLVLTTYALMPRDLEQLRPQAWHVLILDEAQNIK---SSSSKAA 771

Query: 234  AGVLSSRAEFRMGLTATPVYNYGDEMHAVMEFVKPDLLGDWSEFIREWCSSGRIVSNPDG 293
              V   +A  R+ LT TP+ N   E+ ++  F+ P  LGD   F +++ +      + + 
Sbjct: 772  LAVCELQAGQRLCLTGTPMENNLGELWSIFHFLMPGWLGDLKRFNQDYRNPIERHGDSER 831

Query: 294  LGSYL-RDTGYFLRRTEDDPTVDASMPPPNILEWEID------HDLAAVEGEQEIARQLA 346
            +     R   + LRRT++    +       +   E+       ++   V  +Q++  ++A
Sbjct: 832  MAHLASRIRPFLLRRTKEQVATELPAKTEMVHWVELSDAQRDTYEAVRVAMDQKVRDEIA 891

Query: 347  QTVLRGS---FAEAGRAARELDMKMRQLTGI---------AKARAVAAYVSLLLKDSPRV 394
            +     S     +A    R++   +R + G+          K  A+   +  LL +  RV
Sbjct: 892  RNGAARSQIVILDALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLEMLEELLSEGRRV 951

Query: 395  LLAGWHREVYDIWRDAL--APFNPVLYTGSESAAGKQRSVDAFCGGDSRVMMMSLRSGAG 452
            LL      +  +    L        L TG      ++  V  F  G+S V ++SL++G  
Sbjct: 952  LLFSQFTSMLALIEQELEKRKIRYSLLTG--DTRDRRTPVQQFQQGESEVFLISLKAGG- 1008

Query: 453  LDGLQHHCNDAVVG-ELDWSPQVHYQFFGRLRRPGQQKQVNAHYLHTNWGSDPVLLEMLG 511
              GL     D V+  +  W+P    Q   R  R GQ K V    L T    +  +  +  
Sbjct: 1009 -VGLNLTAADTVIHFDPWWNPASENQATDRAYRIGQDKPVFVFKLITRGTVEEKIQLLQQ 1067

Query: 512  IKADQSRGINDPGIAPKPRMTDE 534
             KA  +  + D G A + R+ DE
Sbjct: 1068 EKAALAASLLDGGQAGQWRLGDE 1090