Pairwise Alignments

Query, 350 a.a., Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) from Sphingobium sp. HT1-2

Subject, 631 a.a., 1-deoxyxylulose-5-phosphate synthase from Pseudomonas putida KT2440

 Score = 48.5 bits (114), Expect = 5e-10
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 33/208 (15%)

Query: 65  RVFDTPITECGIIGVAVGMGAYGLRPVPEIQFADYIYPALDQLVSEAARLRYRSAGEFIS 124
           R FD  I E   + +A GM   G +PV  I ++ ++  A DQL+ + A          + 
Sbjct: 369 RYFDVAIAEQHAVTLAAGMACEGSKPVVAI-YSTFLQRAYDQLIHDVA----------VQ 417

Query: 125 PMTVRSPFG-GGIFG--GQTHSQSPEGIFTHVSGVKTVIPSTPYDAKGLLIAAIEDNDPV 181
            + V       G+ G  G TH+ S +   +++  +  ++  TP D          +N+  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSYD--LSYLRCIPGMLVMTPSD----------ENELR 465

Query: 182 IFFEPKRIYNGPFDGHYDTPAKSWAGHADAQVPQGYYRIDLGKARIARPGEALTILCYGT 241
                  +YNGP    Y           +A +      +++GK  + R GE + +L +G 
Sbjct: 466 KMLSTGHLYNGPAAVRYPR-----GTGPNAPISGDLQPLEIGKGVVRRQGEKVALLVFG- 519

Query: 242 MVHVVENTVAKLGIDAEIVDLRSLVPLD 269
            V + E       I+A +VD+R + PLD
Sbjct: 520 -VQLAEAMQVAEQINATVVDMRFVKPLD 546