Pairwise Alignments

Query, 411 a.a., NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) from Sphingobium sp. HT1-2

Subject, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

 Score =  310 bits (793), Expect = 1e-88
 Identities = 160/386 (41%), Positives = 231/386 (59%), Gaps = 7/386 (1%)

Query: 29  INFGPQHPAAHGVLRLVMELDGEIVERCDPHVGLLHRGTEKLIEHKTYMQALPYFDRLDY 88
           +N GP HP+AHG  R+V++LDGE +  C P +G  HRG EK+ E +++   +PY DR+DY
Sbjct: 212 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDY 271

Query: 89  CSPLGMEHSYVLAVEKLLNLEVPLRAQYLRVFFAELTRICNHMLNLGSHVMDVGAMTPNL 148
              +     YVLAVEKL  ++VP +   +R+  AE  RI +H+L LG+++ DVGAMTP  
Sbjct: 272 LGGVMNNLPYVLAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQDVGAMTPVF 331

Query: 149 WLFEIREDCLNFFERASGARMHSAYFRPGGVHQDVPL---KLLTDIADWLDTRLPRLFED 205
           + F  R+      E  +G R+H A++R GGV  D+P    KL+ D  +WL  RL    + 
Sbjct: 332 FTFTDRQRAYTVIEAITGFRLHPAWYRIGGVAHDLPRGWDKLVKDFVEWLPKRLDEYTKA 391

Query: 206 AMSLVVDNRIFKQRNVDISIVSKEDALKWGFSGPMLRGSGIAWDIRKAQPYDVYDRMEFD 265
           A+     N I K R + ++  + ++AL+WG +G  LR +G  +D+RKA+PY  Y+  EF+
Sbjct: 392 ALQ----NSILKGRTIGVAAYNTKEALEWGTTGAGLRATGCNFDLRKARPYSGYENFEFE 447

Query: 266 VPVGTAFDCYDRFMVRVEEVRQSARIMKQCLSEMPEGPIASFDRKVSPPKRGEMKKSMEA 325
           VP+    D YDR MVRVEE+RQS RI+ QCL  MPEGP  +     +PP +    + +E 
Sbjct: 448 VPLAHNGDAYDRCMVRVEEMRQSIRIIDQCLRNMPEGPYKADHPLTTPPPKERTLQHIET 507

Query: 326 LIHHFKLYTEGFHVPAGEVYVATESPKGEFGVYLVSDGSNKPYRCKIRPTAFSHLQAMDF 385
           LI HF   + G  +PA E +   E+ KG    YL SDG    YR +IR  ++ HLQ +  
Sbjct: 508 LITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPS 567

Query: 386 MMKGHMLADTTAVLGAMDIVFGECDR 411
           ++KG M+AD  A LG++D V  + DR
Sbjct: 568 VIKGSMVADLIAYLGSIDFVMADVDR 593