Pairwise Alignments

Query, 517 a.a., NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) from Sphingobium sp. HT1-2

Subject, 510 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Pseudomonas putida KT2440

 Score =  344 bits (882), Expect = 5e-99
 Identities = 190/486 (39%), Positives = 285/486 (58%), Gaps = 24/486 (4%)

Query: 6   ILSLMMAVPMAGAIACLFA---GANNARWIALIATLVDLVLGIVLWVNFDQS-----GAG 57
           IL  ++ +P  G   C      GA   RWIAL+   + L +G+ LW   D +     GA 
Sbjct: 2   ILPWLILIPFIGGFLCWLGERFGATLPRWIALLTMSLLLGIGLWLWGTGDYTLAPAPGAE 61

Query: 58  AQWQFTEYAPIFGRFAWA--LGIDGIALLLIALTVFLMPICIGASWNAINKRVGEYMAAF 115
             W          RF  +  L +DG++LL+I LT  L  + +  SW  I + VG +    
Sbjct: 62  PAWALEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNL 121

Query: 116 LFMEVLMIGVFTAQDLYLFYIMFEAGLIPMYLIIGIWGGAN------RIYASYKFFLYTL 169
           +++   ++GVF A DL+LF+  +E  L+PMY +I +WG ++      RIYA+ KFF++T 
Sbjct: 122 MWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGHSSADGKKTRIYAATKFFIFTQ 181

Query: 170 LGSVLMLIAMMWMV----HEAG--TTRIPDLMAYNFDPKIQIWLFLAFFASFAVKMPMWP 223
              ++ML+A++ +V    +  G  T    DL+       I+  L L FF +FAVK+P+ P
Sbjct: 182 ASGLIMLVAILGLVLVNYNTTGVLTFNYSDLLKAELPAGIEYVLMLGFFIAFAVKLPVVP 241

Query: 224 VHTWLPDAHVQAPTAGSVILAGVLLKMGGYGFIRFSLPMFPEASAQLAPWVWGLSMVAVV 283
            H+WLPDAH QAPTAGSV LAG+LLK   YG +RF+LP+FP ASA+ AP    L ++ + 
Sbjct: 242 FHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIF 301

Query: 284 YTSLIALVQSDMKKLIAYSSVAHMAIVTIGLFAFNQAGLEGAMMVMLGHGLVSGALFLCV 343
           Y + +A  Q+D+K+LIA+SSV+HM  V IG+++ +Q  L+GA++ ML HGL + ALF+  
Sbjct: 302 YGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILS 361

Query: 344 GVIYDRLHTREINRYGGLAINMPRYAVLFLLFTMASVGLPGTSNFVGEFLSLMGIYQVST 403
           G +Y+RLHTR++ + GGL   +     + L F  AS+GLPGT NFVGEFL L+G +    
Sbjct: 362 GQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGSFVHVP 421

Query: 404 WAALICTTGIILGAAYMLYLYRRICYGDQVNADAAAMPDLSAREIWLLAPIAAAVLWMGV 463
           W  +I TTG++ G+ Y L +  R  +G        A   +  RE+ ++  +A  ++ +GV
Sbjct: 422 WITVIATTGLVFGSVYSLIMIHRAYFGPAKTDTVLA--GMDGRELIMVLGLAVLLILLGV 479

Query: 464 YPESFL 469
           YP+ FL
Sbjct: 480 YPQPFL 485