Pairwise Alignments

Query, 478 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Sphingobium sp. HT1-2

Subject, 973 a.a., monovalent cation/H+ antiporter subunit A from Pseudomonas simiae WCS417

 Score =  108 bits (270), Expect = 8e-28
 Identities = 106/425 (24%), Positives = 180/425 (42%), Gaps = 25/425 (5%)

Query: 67  LVRADAFSVYAKALIYGAAGAAILLAPRFFATGGALRPEYAVLIVFAAIGMGMMVSAGDM 126
           ++R D F+     L+ G      L A  + +    +   +A  + F    +G+++S G++
Sbjct: 71  VLRMDGFAWLFSMLVLGIGTLVSLYARYYMSPDDPVPRFFAFFLAFMGAMLGLVIS-GNL 129

Query: 127 LTLYVGLEMNSLASYVLASFMRQDEKSSEAGLKYFVLGSLASGILLYGISLLYGFTGSTA 186
           + +    E+ SL S++L  +      +        ++       LL G+ LL    GS  
Sbjct: 130 IQIVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLAGVMLLGHIVGSYD 189

Query: 187 FDGIAIAMGDGVSKGELFG--LVFVLAGLAFKISAVPFHMWTPDVYEGAPTPVTAFFGSA 244
            D + +A GD +    L+   L  VL G   K +  PFH W P     APTPV+A+  SA
Sbjct: 190 LDRV-LAAGDQIRAHSLYPVMLALVLIGALSKSAQFPFHFWLPHAM-AAPTPVSAYLHSA 247

Query: 245 PKVAAMGLMVRVAIEALGPAGLDWQQIIIFVALASILFGAVAAIGQTSIKRLMAYSSINN 304
             V A G+ +   +        +W  I+      ++L GA  A+ Q  +K L+AYS+I++
Sbjct: 248 TMVKA-GVFLLARLWPSLSGSEEWFWIVGGAGALTLLLGAYCAMFQNDLKGLLAYSTISH 306

Query: 305 VGFALVGLAAGTPAGVAATMSYMAIYVVMTIGAFACILQMRDADGKPVDTIASLAGLSQS 364
           +G   + L   +P    A + ++  +       F     +    G     I  L+GL + 
Sbjct: 307 LGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAGIIDHESG--TRDIRKLSGLVKL 364

Query: 365 RKGLSAAFAIFMFSMAGIPPLFGFWAKFLVFDAAVAANLTALA--AFGIAMSVIGAF--- 419
               +    +   SMAG+P L GF +K + F   V  + TA    A  +  ++ G F   
Sbjct: 365 IPFTATLAMVASASMAGVPLLNGFLSKEMFFAETVFISSTAWVEIALPLIATIAGTFSVA 424

Query: 420 YYLKIIKTIYFDEPA-----APYEAKG--GAVENIIMAACAIVIVFGYLLNPLLDKASAA 472
           Y L+    ++F  PA      P+E      A   +++  C +V +F     P     S  
Sbjct: 425 YALRFTVDVFFGPPATHLPHTPHEPPRWMRAPVELLVFTCLLVGIF-----PAQVVGSIL 479

Query: 473 AAASL 477
           AAA+L
Sbjct: 480 AAAAL 484