Pairwise Alignments

Query, 629 a.a., DNA primase DnaG from Sphingobium sp. HT1-2

Subject, 660 a.a., DNA primase from Pseudomonas putida KT2440

 Score =  311 bits (797), Expect = 6e-89
 Identities = 179/420 (42%), Positives = 246/420 (58%), Gaps = 13/420 (3%)

Query: 3   LTPQ-WLDELRARTSLSTLIGKTVKVQKAGREYKACCPFHNEKTPSFTINDEKGFYHCFG 61
           L PQ ++D+L  R  +  ++   V+++K G+ Y ACCPFH EKTPSFT++ +K FY+CFG
Sbjct: 4   LIPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFG 63

Query: 62  CGAHGDAIRWMTDQRGLPFMEAVKELAATAGMEVPAADPRAAKRAEQAKG--LHDAMGAA 119
           CGA G+A+ ++ D   L F +AV+ELA  AGMEVP    R  ++  Q     L+  + AA
Sbjct: 64  CGAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPREQGRRDQKPRQPTDSPLYPLLDAA 123

Query: 120 QSFFEDQLGGIDGGDARA-YLAKRGISDATRRTFGFGYSPDSRGKLKGALKEFG-----E 173
             F+   L       A   YL  RG+S    R FG G++P     L   LK  G     +
Sbjct: 124 SEFYRQALRSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNL---LKHLGADTLQQ 180

Query: 174 PMLVEAGLLIDPDGERDTYDRFRGRLMLPIRDIRGRVIAFGGRIIGQGEPKYLNSPDTPL 233
            ++++AGLLI+       YDRFR R+M PIRD RGR+IAFGGR++G  +PKYLNSP+TP+
Sbjct: 181 KVMIDAGLLIENAESGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240

Query: 234 FDKGRTLYNIDRASPASRQSGRVIVVEGYMDVIALAQAGFGDSVAPLGTALTEHQIERLW 293
           F KG+ LY +  A   +R    +IVVEGYMDVIALAQ G  ++VA LGTA +E  ++RL+
Sbjct: 241 FHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300

Query: 294 KMVEVPILCFDGDAAGQKAAIRAATRALPLLRPGHSLAFATLPAGQDPDDLLRAEGPRA- 352
           ++V   + CFDGD AG+KAA RA    L  L+ G    F  LP G+DPD L+RAEG  A 
Sbjct: 301 RVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVRAEGTDAF 360

Query: 353 MDAVLAGAQPLVDRLWEHEQKVGPLDTPEQKAALKQRLAAHSDSIQHPDVRALYAQAFRE 412
           M  +   +QPL D  +E         + E KA +    A   + I   ++R L     +E
Sbjct: 361 MARINQHSQPLADYFFEQLGVEADPRSLEGKAHMATLAAPLIEKIPGANLRQLMRNRLKE 420