Pairwise Alignments

Query, 392 a.a., Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) from Sphingobium sp. HT1-2

Subject, 378 a.a., carbamoyl phosphate synthase small subunit from Pseudomonas simiae WCS417

 Score =  378 bits (971), Expect = e-109
 Identities = 200/371 (53%), Positives = 246/371 (66%), Gaps = 6/371 (1%)

Query: 16  VLVFADGSAVFGRGFGAVGDAVGELCFNTSITGYQEIMTDPSYAGQIITFTFPHIGNVGT 75
           +L  ADGS   G   GA G  VGE+ FNT++TGYQEI+TDPSYA QI+T T+PHIGN GT
Sbjct: 6   ILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTGT 65

Query: 76  NLDDVEADSPYALGCIVRQDVTAPSNFRNVEPFDQWMKEKGRIGLAGVDTRALTRLIREK 135
             +DVE+D  ++ G ++R      SN+RN      ++K    + +AG+DTR LTR++REK
Sbjct: 66  TPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILREK 125

Query: 136 GAPN-VVLAHDPDGNFDIAALAAKAAAWPGLEGMDLAIEVTGKESRLWKDGIWTIG-HGY 193
           G+ N  ++  D   N    A  A A  +PGL+GMDLA  V+ KE   W+  +W +    +
Sbjct: 126 GSQNGCIMVGD---NISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTVWDLKTDSH 182

Query: 194 GLNEAGEERPHVVAIDYGAKNNIFRNLVKAGARVTVLPATATFDQVKALNPDGVFLSNGP 253
              +A +   HVVA DYG K NI R LV+ G RVTV+PA      V AL PDGVFLSNGP
Sbjct: 183 ATIDAADLPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFLSNGP 242

Query: 254 GDPAATGDYAVPVIQQVLAADIPVFGICLGHQLLGLAVGAKTIKMHQGHRGANHPVKRLS 313
           GDP    DYA+  I+ VL  +IPVFGICLGHQLL LA GAKT+KM  GH GANHPV+ L 
Sbjct: 243 GDPEPC-DYAIQAIKDVLETEIPVFGICLGHQLLALASGAKTLKMGHGHHGANHPVQDLD 301

Query: 314 DGLVEITSMNHGFAVDVDTLPANARSTHVSLFDGSNCGIELTDKSAFSVQYHPEASPGPQ 373
            G+V ITS NHGFAVD  TLP+N R+ H SLFDGS  GIE TDKSAFS Q HPEASPGP 
Sbjct: 302 TGVVMITSQNHGFAVDEATLPSNVRAIHKSLFDGSLQGIERTDKSAFSFQGHPEASPGPN 361

Query: 374 DSFYLFKKFVD 384
           D   LF +F++
Sbjct: 362 DVAPLFDRFIN 372