Pairwise Alignments

Query, 309 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 23/305 (7%)

Query: 4   EEALGWVIRTRD-PEFDDWDAFTIWLEGDPARATAYDALMA----ADADLADMVPAEPIV 58
           + AL W+    D P   D   F+ WL  DPA   AY         ++     +   E +V
Sbjct: 11  QAALAWLSLLHDQPSGGDQATFSQWLRADPAHVEAYAQAQVLWELSEVPARKLADEEALV 70

Query: 59  MPVAANDAGERHR-RPLRWIGGGAIAAALVAAVSVGLLNRSDIY------SITTRPGETR 111
           +    N      R R  RW G  A+AA L+  V +G+  +   +         T PGE +
Sbjct: 71  LQGYLNAMNPSKRSRVARWSGALAMAACLLLMVFMGVGWQPSRWVDDFGADYVTAPGEVK 130

Query: 112 SIALDDGTRIELNGGTTLRLD-RKNARFAALDAGEAAFTVRHDAADPFRVTVGDAVFEDA 170
           ++ L D +++ L+  + + +D  +  R   L  G   F+V H     F V  G       
Sbjct: 131 TVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTH-TGQSFVVEAGSGEARVL 189

Query: 171 GTVFNIVHSGNATRIGVSEGKVIYNP--QAEAISLPAGR--ALSDG-AEGLRVMDVAPQA 225
           GT F +        + V  G+V   P  Q +   L AG+  A ++G A+ L  +D   ++
Sbjct: 190 GTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGVADALHAVD--SES 247

Query: 226 VASWRQGQLIYANAPVGDVTQDIARSL-GVTLAATPGAQAMRFTGTIRLERDPSRFFAAA 284
             +WR G L Y  AP+ DV +D+ R   G  L       A R +G+    +DP     A 
Sbjct: 248 RLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFP-SKDPQAVLNAL 306

Query: 285 APLMG 289
             ++G
Sbjct: 307 QAVLG 311